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Cagatay Demiralp, PhD 2012

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Projects

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Publications

2014

[Demiralp et al., 2014]
Cagatay Demiralp, Carlos E Scheiddegger, Gordon L Kindlmann, David H. Laidlaw, and Jeffrey Heer. Visual Embedding: A Model for Visualization. IEEE Computer Graphics and Applications, 20(1), January 2014. (bibtex: Demiralp-2014-VEM).

2012

[Demiralp et al., 2012]
Cagatay Demiralp, Radu Jianu, and David H. Laidlaw. Exploring Brain Connectivity with Two-dimensional Maps. In New Developments in the Visualization and Processing of Tensor Fields. LNCS-Springer, 2012. (pdf) (bibtex: Demiralp-2012-EBC).
[Demiralp, 2012]
Cagatay Demiralp. Exploring Brain Connectivity with Two-dimensional Neural Maps. In Visual Strategies. Yale Press, 2012. (bibtex: Demiralp-2012-B2D).
[Zikic et al., 2012]
D. Zikic, B. Glocker, E. Konukoglu, A. Criminisi, Cagatay Demiralp, J. Shatton, O. Thomas, T. Das, R. Jena, and S. Price. Decision Forests for Tissue-specific Segmentation of High-grade Gliomas in Multi-channel MR. In Proceedings of MICCAI, 2012. (pdf) (bibtex: Zikic-2012-DFT).
[Zikic et al., 2012]
D. Zikic, B. Glocker, E. Konukoglu, J. Shatton, A. Criminisi, D. H. Ye, Cagatay Demiralp, , O. Thomas, T. Das, R. Jena, and S. Price. Context-sensitive Classification Forests for Segmentation of Brain Tumor Tissues. In Proceedings of MICCAI BRATS WorkshopMICCAI 2012 Challenge on Multimodal Brain Tumor Segmentation, 2012. (pdf) (bibtex: Zikic-2012-CFI).

2011

[Demiralp and Laidlaw, 2011]
Cagatay Demiralp and David H. Laidlaw. Generalizing Diffusion Tensor Model using Probabilistic Inference in Markov Random Fields. In Proceedings of ISMRM, 2011. (bibtex: Demiralp-2011-GDT).
[Demiralp and Laidlaw, 2011]
Cagatay Demiralp and David H. Laidlaw. Generalizing Diffusion Tensor Model using Probabilistic Inference in Markov Random Fields. In Proceedings of MICCAI CDMRI Workshop, 2011. (bibtex: Demiralp-2011-MRF).
[Demiralp and Laidlaw, 2011]
Cagatay Demiralp and David H. Laidlaw. Theories of Visualization: Are There Any? . VisWeek'11 Panel, 2011. (pdf) (bibtex: Demiralp-2011-TVS).
[Jianu et al., 2011]
Radu Jianu, Cagatay Demiralp, and David H. Laidlaw. Exploring brain connectivity with two-dimensional neural maps. IEEE TVCG, 2011. (pdf) (bibtex: Jianu-2011-EBJ).

2010

[Demiralp and Laidlaw, 2010]
Cagatay Demiralp and David H. Laidlaw. Tract-based Probability Densities of Diffusivity Measures in DT-MRI. In Proceedings of MICCAI, 2010. (pdf) (bibtex: Demiralp-2010-TPD).
[Jianu et al., 2010]
Radu Jianu, Cagatay Demiralp, and David H. Laidlaw. Visualizing and exploring tractograms via two-dimensional connectivity maps. In Proceedings of ISMRM'10, 2010. (pdf) (bibtex: Jianu-2010-VET).
[Jianu et al., 2010]
Radu Jianu, Cagatay Demiralp, and David H. Laidlaw. Exploring brain connectivity with two-dimensional neural maps. In IEEE Visualization 2010 Poster Compendium (Best Poster Award), 2010. (pdf) (bibtex: Jianu-2010-EBC).
[Taubin and Demiralp, 2010]
Gabriel Taubin and Cagatay Demiralp. Surface Deformations Driven by Vector-Valued 1-Forms. In Proceedings of SMI'10, 2010. (pdf) (bibtex: Taubin-2010-SDV).

2009

[Demiralp et al., 2009]
Cagatay Demiralp, John F. Hughes, and David H. Laidlaw. Coloring 3D Line Fields Using Boy's Real Projective Plane Immersion. IEEE Trans. on Visualization and Computer Graphics (Proc. Visualization '09), 15(6):1457-1463, 2009. (pdf) (bibtex: Demiralp-2009-CLF).
[Demiralp and Laidlaw, 2009]
Cagatay Demiralp and David H. Laidlaw. Similarity Coloring of DTI Fiber Tracts. In Proceedings of DMFC Workshop at MICCAI, 2009. (pdf) (bibtex: Demiralp-2009-SCF).
[Halilaj et al., 2009]
Eni Halilaj, Cagatay Demiralp, Stephen Correia, and David H. Laidlaw. Quantitative Tractography Metrics of White Matter Integrity in Diffusion-Tensor MRI Using Diffusivity Scalars. In In Proceedings of ISMRM, 2009. (pdf) (bibtex: Halilaj-2009-ISM).
[Jianu et al., 2009]
Radu Jianu, Cagatay Demiralp, and David H. Laidlaw. Exploring 3D DTI fiber-tracts with linked 2D representations. IEEE Trans. on Visualization and Computer Graphics (Proc. Visualization '09), 15(6):1449-1456, 2009. (pdf) (bibtex: Jianu-2009-E3D).

2008

[Demiralp et al., 2008]
Cagatay Demiralp, Gregory Shakhnarovich, Song Zhang, and David H. Laidlaw. Slicing-based coherence measure for refining clusters of 3D curves. In Proceedings of MICCAI, 2008. (pdf) (bibtex: Demiralp-2008-SCM).
[Demiralp et al., 2008]
Cagatay Demiralp, John F. Hughes, and David H. Laidlaw. Using Boy's Real Projective Plane Immersion for Coloring DT-MRI Slices. In Proceedings of ISMRM, 2008. (bibtex: Demiralp-2008-UBR).

2007

[Demiralp et al., 2007]
Cagatay Demiralp, Daniel Acevedo, Song Zhang, David Tate, Stephen Correia, and David H. Laidlaw. Connectivity-aware sectional visualization of DTI volumes. Technical report, Department of Computer Science, Brown University, 2007. (pdf) (bibtex: Demiralp-2007-CSV).
[Demiralp, 2007]
Cagatay Demiralp. Charm: A charming network coordinate system. Technical report, Brown University, Department of Computer Science, 2007. (pdf) (bibtex: Demiralp-2007-CCN).
[Jianu et al., 2007]
Doria Jianu, Wenjin Zhou, Cagatay Demiralp, and David H. Laidlaw. Visualizing Spatial Relations Between 3D-DTI Integral Curves Using Texture Patterns. In IEEE Visualization Poster Compendium, 2007. (pdf) (bibtex: Jianu-2007-VSR).

2006

[Demiralp et al., 2006]
Cagatay Demiralp, Song Zhang, David Tate, Stephen Correia, and David H. Laidlaw. Connectivity-aware sectional visualization of 3D DTI volumes using perceptual flat-torus coloring and edge rendering. In Proceedings of Eurographics, 2006. (pdf) (bibtex: Demiralp-2006-CSV).
[Demiralp et al., 2006]
Cagatay Demiralp, Cullen Jackson, David Karelitz, Song Zhang, and David H. Laidlaw. CAVE and Fishtank Virtual-Reality Displays: A Qualitative and Quantitative Comparison. IEEE Transactions on Visualization and Computer Graphics, 12(3):323-330, May 2006. (pdf) (bibtex: Demiralp-2006-CFV).

2004

[Marai et al., 2004]
G. Elisabeta Marai, Cagatay Demiralp, Stuart Andrews, and David H. Laidlaw. JointViewer an interactive system for exploring orthopedic data. IEEE Visualization 2004 Poster Compendium, October 2004. (pdf) (bibtex: Marai-2004-JAI).

2003

[Demiralp et al., 2003]
Cagatay Demiralp, David H. Laidlaw, Cullen Jackson, Daniel Keefe, and Song Zhang. Subjective Usefulness of CAVE and Fish Tank VR Display Systems for a Scientific Visualization Application. In IEEE Visualization Poster Compendium, Seattle, WA, 2003. (pdf) (bibtex: Demiralp-2003-SUC).
[Marai et al., 2003]
G. Elisabeta Marai, David H. Laidlaw, Cagatay Demiralp, Stuart Andrews, Cindy Grimm, and Joseph J. Crisco. Estimating joint contact areas and ligament lengths from bone kinematics and surfaces. IEEE Transactions on Biomedical Engineering, 51(5):790-799, May 2003. (pdf) (bibtex: Marai-2003-EJC).
[Zhang et al., 2003]
Song Zhang, Cagatay Demiralp, and David H. Laidlaw. Visualizing Diffusion Tensor MR Images Using Streamtubes and Streamsurfaces. IEEE Transactions on Visualization and Computer Graphics, 9(4):454-462, October 2003. (pdf) (bibtex: Zhang-2003-VDT).

2002

[DaSilva et al., 2002]
Marco DaSilva, Song Zhang, Cagatay Demiralp, and David H. Laidlaw. Visualizing the Differences between Diffusion Tensor Volume Images. In Proceedings ISMRM Workshop in Diffusion MRI: Biophysical Issues, pages 237-238, March 2002. (pdf) (bibtex: DaSilva-2002-VDD).
[Marai et al., 2002]
G. Elisabeta Marai, Cagatay Demiralp, Stuart Andrews, David H. Laidlaw, Cindy Grimm, and Joseph J. Crisco. Visualization of Contact Areas and Ligament Paths in Joints. Technical Report CS-02-15, Brown University Computer Science Department, August 2002. (pdf) (bibtex: Marai-2002-VOC).
[Marai et al., 2002]
G. Elisabeta Marai, David H. Laidlaw, Cagatay Demiralp, Cindy Grimm, Joseph J. Crisco, Douglas Moore, and E. Akelman. Contact Areas and Ligament Lengths are Abnormal in Patients with Malunited Distal Radius Fracture Despite Normal Radioulnar Kinematics. In World Congress Biomechanics, 2002. (pdf) (bibtex: Marai-2002-CAA).

2001

[Crisco et al., 2001]
Joseph J. Crisco, Cagatay Demiralp, David H. Laidlaw, A-P. C. Weiss, E. Akelman, and S.W. Wolfe. Interactive Visualization of 3D Carpal Kinematics and Bony Anatomy. In Am. Soc. for Surgery of the Hand 56th Annual Meeting, October 2001. (bibtex: Crisco-2001-IV3).
[DaSilva et al., 2001]
Marco DaSilva, Song Zhang, Cagatay Demiralp, and David H. Laidlaw. Visualizing Diffusion Tensor Volume Differences. In Visualization '01 Work in Progress Proceedings, pages 16-17, October 2001. (pdf) (bibtex: DaSilva-2001-VDT).
[Demiralp et al., 2001]
Cagatay Demiralp, G. Elisabeta Marai, Stuart Andrews, David H. Laidlaw, Joseph J. Crisco, and Cindy Grimm. Modeling and Visualization of Inter-Bone Distances in Joints. In Visualization '01 Work in Progress Proceedings, pages 24-25, October 2001. (pdf) (bibtex: Demiralp-2001-MVI).
[Zhang et al., 2001]
Song Zhang, Cagatay Demiralp, Daniel Keefe, Marco DaSilva, Benjamin D. Greenberg, Peter J. Basser, Carlo Pierpaoli, E. A. Chiocca, T. S. Deisboeck, and David H. Laidlaw. An Immersive Virtual Environment for DT-MRI Volume Visualization Applications: a Case Study. In Proceedings of IEEE Visualization 2001, pages 437-440, October 2001. (pdf) (bibtex: Zhang-2001-IVE).
[Zhang et al., 2001]
Song Zhang, Cagatay Demiralp, Marco DaSilva, Daniel Keefe, David H. Laidlaw, Benjamin D. Greenberg, Peter J. Basser, Carlo Pierpaoli, E.A. Chiocca, and T. S. Diesboeck. Toward Application of Virtual Reality to Visualization of DT-MRI Volumes. In Proceedings MICCAI, October 2001. (pdf) (bibtex: Zhang-2001-TAV).
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