Areas Home Areas Home Results Home Results Home Organization Home Organization Home Resources Home Graphics Computer Science Brown University Lab Home Visualization Research Group Update Search

New Tractography literature

Author: Song Zhang

[Basser et al., 2000]
Peter J. Basser, Sinisa Pajevic, Carlo Pierpaoli, Jeffrey Duda, and Akram Aldroubi. In Vivo Fiber Tractography Using DT-MRI Data. Magnetic Resonance in Medicine, 44:625-632, 2000. (pdf) (bibtex: Basser-2000-IFT).
An overview of the issues in white matter fiber tracking.
[Xue et al., 1999]
Rong Xue, Peter C.M. van Zijl, Barbara J. Crain, Meiyappan Solaiyappan, and Susumu Mori. In vivo three-dimensional reconstruction of rat brain axonal projections by diffusion tensor imaging. Magnetic Resonance in Medicine, 42:1123-1127, 1999. (pdf) (bibtex: Xue-1999-ITR).
Fiber tracking in mice brain white matter
[Weinstein et al., 1999]
David M. Weinstein, Gordon L. Kindlmann, and Eric C. Lundberg. Tensorlines: Advection-diffusion based propagation through diffusion tensor fields. In IEEE Visualization '99, pages 249-254, 1999. (bibtex: Weinstein-1999-TAD).
Stablizing the tracking in DTI
[Kindlmann and Weinstein, 1999]
Gordon L. Kindlmann and David M. Weinstein. Hue-balls and lit-tensors for direct volume rendering of diffusion tensor fields. In IEEE Visualization '99, pages 183-190, 1999. (bibtex: Kindlmann-1999-HLD).
Volume rendering approach in DTI visualization
[Poupon et al., 2000]
C. Poupon, C. A. Clark, V. Frouin, J. Regis, I. Block, D. Le Behan, and J.-F. Mangin. Regularization of Diffusion-Based Direction Maps for the Tracking of Brain White Matter Fascicles. NeuroImage, 12:184-195, 2000. (ps) (bibtex: Poupon-2000-RDD).
Regularizing DTI according to low curvature assumption
[Inati et al., 2001]
S. Inati, H. Farid, K. Sherwin, and S. Grafton. A Global Probabilistic Approach to Fiber Tractography with Diffusion Tensor MRI . In Human Brain Mapping 2001, 2001. (bibtex: Inati-2001-GPA).
Use expectation maximization on a set of Bezier curve models for fiber tracking.
[Brun et al., 2002]
A. Brun, M. Bjornemo, R. Kikinis, and C.-F. Westin. White Matter Tractography Using Sequential Importance Sampling. In ISMRM 2002, page 1131, 2002. (pdf) (bibtex: Brun-2002-WMT).
see Bjornemo:2002:WMF
[Bjornemo and Brun, 2002]
Mats Bjornemo and Anders Brun. White Matter Fiber Tracking Using Diffusion Tensor MRI. Master's thesis, Linkoping University, 2002. (pdf) (bibtex: Bjornemo-2002-WMF).
Using SISR(sequential importance sampling and resampling) method to estimate the importance of the a fiber(statisical model).
[Batchelor et al., 2002]
P.G. Batchelor, D.L.G. Hill, D. Atkinson, F. Calamanten, and A. Connellyn. Fibre-tracking by solving the diffusion-convection equation. In Proceedings of ISMRM 2002, 2002. (pdf) (bibtex: Batchelor-2002-FSD).
Added a convection term to the diffusion equation, and use FEM to solve the PDE.
[DS, 2002]
Tuch DS. Mapping cortical connectivity with diffusion MRI. In 2002 IEEE International Symposium on Biomedical Imaging, 2002. (bibtex: Tuch-2002-MCC).
[ .html ] Use a statistical model for the path and estimate the probability of the path, find the optimal path between the two points.
[Tuch, 2002]
D. S. Tuch. Diffusion MRI of complex tissue structure. PhD thesis, Harvard, 2002. (pdf) (bibtex: Tuch-2002-DMC).
[Tuch et al., 2002]
D.S. Tuch, T.G. Reese, M.R. Wiegell, N. Makris, J.W. Belliveau, and V.J. Wedeen. High angular resolution diffusion imaging reveals intravoxel white matter fiber heterogeneity. Magnetic Resonance in Medicine, 48(4):577-582, October 2002. (pdf) (bibtex: Tuch-2002-HAR).
As title suggests, the paper show that high angular diffusion imaging helps reveal the crossing.
[Coulon et al., 2001]
O. Coulon, D.C. Alexander, and S.R. Arridge. Tensor Field Regularisation for DT-MR Images. In Proceedings of British Conference on Medical Image Understanding and Analysis, 2001. (pdf) (bibtex: Coulon-2001-TFR).
Regularizing principle diffusion direction in an anisotropic fashion. The regularization increases smoothness in PPD.
[Alexander et al., 2001]
D. C. Alexander, C. Pierpaoli, P. J. Basser, and J. C. Gee. Spatial Transformations of Diffusion Tensor Magnetic Resonance Images. IEEE TRANSACTIONS ON MEDICAL IMAGING, 20(11), November 2001. (pdf) (bibtex: Alexander-2001-STD).
How to perserve orientational information while applying transformations to DTI datasets.
[Donnell et al., 2002]
Lauren O Donnell, Steven Haker, and Carl-Fredrik Westin. New Approaches to Estimation of White Matter Connectivity in Diffusion Tensor MRI: Elliptic PDEs and Geodesics in a Tensor-Warped Space . In MICCAI2002, 2002. (bibtex: ODonnell-2002-NAE).
Fiber tracking by solving the steady state heat flow in DTI field.
[Campbell et al., 2002]
J. S. W. Campbell, K. Siddiqi, Baba C. Vemuri, and G. B. Pike. A Geometric Flow for White Matter Fibre Tract Reconstruction. In International Symposium On Biomedical Imaging, 2002. (pdf) (bibtex: Campbell-2002-GFW).
Using geometric flow to construct fibers. Construct multipal fibers in parallelle. Deal with branches and merging points.
[Westin et al., 2002]
C.-F. Westin, S.E. Maier, H. Mamata, A. Nabavi, F.A. Jolesz, and R. Kikinis. Processing and visualization for diffusion tensor MRI. Medical Image Analysis, 6(93-108), 2002. (pdf) (bibtex: Westin-2002-PVD).
[Parker et al., 2002]
Geoffrey J. M. Parker, Klaas E. Stephan, Gareth J. Barker, James B. Rowe, David G. MacManus, Claudia A. M. Wheeler-Kingshott, Olga Ciccarelli, Richard E. Passingham, Rachel L. Spinks, Roger N. Lemon, and Robert Turner. Initial Demonstration of in Vivo Tracing of Axonal Projections in the Macaque Brain and Comparison with the Human Brain Using Diffusion Tensor Imaging and Fast Marching Tractography. NeuroImage, 15(797-809), April 2002. (pdf) (bibtex: Parker-2002-IDI).
Using fast marching tractography to track fibers in macaque brain and compare it with human brain.
[AI et al., 2001]
Holodny AI, Schwartz TH, Ollenschleger M, Liu W, and Schulder M. Tumor involvement of the corticospinal tract by tumor: diffusion magnetic resonance tractography with intraoperative correlation. Journal of Neurosurgery, 95(1082), 2001. (bibtex: Holodny-2001-ICT).
[Hagmann et al., 2002]
P. Hagmann, J.-P. Thiran, P. Vandergheynst, S. Clarke, and R. Meuli. Statistical Fiber Tracking on DT-MRI data as a Potential Tool for Morphological Brain Studies. In ISMRM Workshop on Diffusion MRI: Biophysical Issues (2002), page 240, 2002. (pdf) (bibtex: Hagmann-2002-SFT).
Use a virtual partical random walk model to track the fibers.
[Bjornemo et al., 2002]
Mats Bjornemo, Anders Brun, Ron Kikinis, and Carl-Fredrik Westin. Regularized Stochastic White Matter Tractography Using Diffusion Tensor MRI. In MICCAI2002, 2002. (pdf) (bibtex: Bjornemo-2002-RSW).
Abstract. The development of Diffusion Tensor MRI has raised hopes in the neuro-science community for in vivo methods to track fiber paths in the white matter. A number of approaches have been presented, but there are still several essential problems that need to be solved. In this paper a novel fiber propaga-tion model is proposed, based on stochastics and regularization, allowing paths originating in one point to branch and return a probability distribution of possible paths. The proposed method utilizes the principles of a statistical Monte Carlo method called Sequential Importance Sampling and Resampling (SISR).
[Pfefferbaum et al., 2000]
Adolf Pfefferbaum, Edith V. Sullivan, Maj Hedehus, Kelvin O. Lim, Elfar Adalsteinsson, and Michael Moseley. Age-Related Decline in Brain White Matter Anisotropy Measured With Spatially Corrected Echo-Planar Diffusion Tensor Imaging. Magnetic Resonance in Medicine, 44(2):259-268, August 2000. (pdf) (bibtex: Pfefferbaum-2000-ARD).
[Guimond et al., 2002]
Alexandre Guimond, Charles R. G. Guttmann, Simon K. Warfield, and Carl-Fredrik Westin. Deformable Registration of DT-MRI Data Based on Transfomration Invariant Tensor Characteristics. In Proceedings of the IEEE International Symposium on Biomedical Imaging, July 2002. (pdf) (bibtex: Guimond-2002-DRD).
[Ruiz-Alzola et al., 2002]
J. Ruiz-Alzola, C.F. Westin, S.K. Warfield, C. Alberola, S. Maier, and R. Kikinis. Nonrigid registration of 3D tensor medical data. Medical Image Analysis, 6(2):143-161, June 2002. (pdf) (bibtex: RuizAlzola-2002-NR3).
[Zhang et al., 2004]
Song Zhang, Mark Bastin, David H. Laidlaw, Saurabh Sinha, Paul A. Armitage, and Thomas S. Deisboeck. Visualization and Analysis of White Matter Structural Asymmetry in Diffusion Tensor MR Imaging Data. Magnetic Resonance in Medicine, 51(1):140-147, 2004. (pdf) (bibtex: Zhang-2004-VAW).
[Papadakis et al., 1999]
Nikolaos G. Papadakis, Da Xing, Christopher L. H. Huang, Laurance D. Hall, and T. Adrian Carpenter. A Comparative Study of Acquisition Schemes for Diffusion Tensor Imaging Using MRI. Journal of Magnetic Resonance, 137(1):67-82, March 1999. (pdf) (bibtex: Papadakis-1999-CSA).
[Piegl and Tiller, 1995]
Les Piegl and Wayne Tiller. The Nurbs Book. Springer, 1995. (bibtex: Piegl-1995-NBK).
[Correia et al., 2004]
Steve Correia, Song Zhang, David H. Laidlaw, Paul Malloy, and Steven Salloway. Diffusion-tensor imaging: linear, planar, and spherical diffusion in CADASIL. In 9th International Conference on Alzheimer's Disease and Related Disorders, 2004. (bibtex: Correia-2004-DTI).
[Behrens et al., 2003]
T.E.J. Behrens, M.W. Woolrich, M. Jenkinson, H. Johansen-Berg, R.G. Nunes, S. Clare, P.M. Matthews, J.M. Brady, and S.M. Smith. Characterization and Propagation of Uncertainty in Diffusion-Weighted MR Imaging. Magnetic Resonance in Medicine, 50:1077-1088, 2003. (pdf) (bibtex: Behrens-2003-CPU).
[Catani et al., 2002]
Marco Catani, Robert J. Howard, Sinisa Pajevic, and Derek K. Jones. Virtual in Vivo Interactive Dissection of White Matter Fasciculi in the Human Brain. NeuroImage, 17:77-94, 2002. (pdf) (bibtex: Catani-2002-VII).
[Kemper, 2003]
Corey Ann Kemper. Incorporation of Diffusion Tensor MRI in Non-Rigid Registration for Image-Guided Neurosurgery. Master's thesis, Massachusetts Institute of Technology, 2003. (pdf) (bibtex: Kemper-2003-IDT).
[Xu et al., 2002]
Dongrong Xu, Susumu Mori, Meiyappan Solaiyappan, Peter C. M. van Zijl, and Christos Davatzikos. A Framework for Callosal Fiber Distribution Analysis. NeuroImage, 17:1131-1143, 2002. (pdf) (bibtex: Xu-2002-FCF).
[Basser and Pajevic, 2003]
Peter J. Basser and Sinisa Pajevic. Dealing with Uncertainty in Diffusion Tensor MR Data. Israel Journal of Chemistry, 43:129-144, 2003. (pdf) (bibtex: Basser-2003-DUD).
[Jones, 2003]
Jerek K. Jones. Determining and Visualizing Uncertainty in Estimates of Fiber Orientation From Diffusion Tensor MRI. Magnetic Resonance in Medicine, 49:7-12, 2003. (pdf) (bibtex: Jones-2003-DVN).
[Bihan et al., 2001]
Denis Le Bihan, Jean-Francois Mangin, Cyril Poupon, Chris A. Clark, Sabina Pappata, Nicolas Molko, and Hughes Chabriat. Diffusion Tensor Imaging: Concepts and Applications. JOURNAL OF MAGNETIC RESONANCE IMAGING, 13:534-546, 2001. (pdf) (bibtex: LeBihan-2001-DTI).
[Zhukov et al., 2000]
Leonid Zhukov, David Weinstein, and Chris Johnson. Independent Component Analysis for EEG Source Localization In Realistic Head Models. IEEE Engineering in Medicine and Biology, 3(19):87-96, May 2000. (pdf) (bibtex: Zhukov-2000-ICA).
[Zhukov and Barr, 2002]
L. Zhukov and A. Barr. Oriented tensor reconstruction: tracing neural pathways from diffusion tensor MRI. In Proceedings of the IEEE Visualization '02, pages 387-394, 2002. (pdf) (bibtex: Zhukov-2002-OTR).
[Frank, 2002]
Lawrence R. Frank. Characterization of Anisotropy in High Angular Resolution Diffusion-Weighted MRI. Magnetic Resonance in Medicine, 47:1083-1099, 2002. (pdf) (bibtex: Frank-2002-CAH).
[Jones et al., 2002]
D. K. Jones, L.D. Griffin, D.C. Alexander, M. Catani, M.A. Horsfield, R. Howard, and S.C. Williams. Spatial normalization and averaging of diffusion tensor MRI data sets. Neuroimage, 17(2):592-617, 2002. (pdf) (bibtex: Jones-2002-SNA).
[Lazar et al., 2003]
Mariana Lazar, David M.Weinstein, Jay S.Tsuruda, Khader M.Hasan, Konstantinos Arfanakis, M.Elizabeth Meyerand, Benham Badie, Howard A.Rowley, Victor Haughton, Aaron Field, , and Andrew L.Alexander. White Matter Tractography Using Diffusion Tensor Deflection. Human Brain Mapping, 18:306-321, 2003. (pdf) (bibtex: Lazar-2003-WMT).
[Park et al., 2003]
Hae-Jeong Park, Marek Kubicki, Martha E. Shenton, Alexandre Guimond, Robert W. McCarley, Stephan E. Maier, Ron Kikinis, Ferenc A. Jolesz, and Carl-Fredrik Westin. Spatial normalization of diffusion tensor MRI using multiple channels. NeuroImage, 20:1995-2009, 2003. (pdf) (bibtex: Park-2003-SND).
[Pierpaoli et al., 2001]
Carlo Pierpaoli, Alan Barnett, Sinisa Pajevic, Robert Chen, LaRoy Penix, Anette Virta, and Peter Basser. Water Diffusion Changes in Wallerian Degeneration and Their Dependence on White Matter Architecture. NeuroImage, 13:1174-1185, 2001. (pdf) (bibtex: Pierpaoli-2001-WDC).
[SIJBERS, 1998]
Jan SIJBERS. SIGNAL AND NOISE ESTIMATION FROM MAGNETIC RESONANCE IMAGES. PhD thesis, UNIVERSITEIT ANTWERPEN, 1998. (pdf) (bibtex: Sijbers-1998-SNA).
[Stegmann, 2004]
Mikkel B. Stegmann. Generative Interpretation of Medical Images. PhD thesis, Informatics and Mathematical Modelling Technical University of Denmark, 2004. (pdf) (bibtex: Stegmann-2004-GIM).
[Turk and Banks, 1996]
G. Turk and D. Banks. Image-guided streamline placement. In Proceedings of SIGGRAPH 96, pages 453-460. ACM SIGGRAPH, 1996. (pdf) (bibtex: Turk-1996-IGS).
[Aldroubi and Basser, 1999]
Akram Aldroubi and Peter Basser. Reconstruction of vector and tensor fields from sampled discrete data. Contemporary Mathematics of the Amer. Math. Soc., 247:1-15, 1999. (pdf) (bibtex: Aldroubi-1999-RVT).
[Parker et al., 2000]
Geoffrey J.M. Parker, Julia A. Schnabel, Mark R. Symms, David J. Werring, and Gareth J. Barker. Nonlinear Smoothing for Reduction of Systematic and Random Errors in Diffusion Tensor Imaging. JOURNAL OF MAGNETIC RESONANCE IMAGING, 11:702-710, 2000. (pdf) (bibtex: Parker-2000-NSR).
[Zheng and Pang, 2002]
Xiaoqiang Zheng and Alex Pang. Volume Deformation For Tensor Visualization. In Proceedings of IEEE Visualization, pages 379-386, 2002. (pdf) (bibtex: Zheng-2002-VDF).
[Ciccarelli et al., 2003]
O. Ciccarelli, A.T. Toosy, G.J.M. Parker, C.A.M. Wheeler-Kingshott, G.J. Barker, D.H. Miller, and A.J. Thompson. Diffusion tractography based group mapping of major white-matter pathways in the human brain. NeuroImage, 19:1545-1555, 2003. (pdf) (bibtex: Ciccarelli-2003-DTB).
[Ciccarelli et al., 2003]
O. Ciccarelli, G.J.M. Parker, A.T. Toosy, C.A.M. Wheeler-Kingshott, G.J. Barker, P.A. Boulby, D.H. Miller, and A.J. Thompson. From diffusion tractography to quantitative white matter tract measures: a reproducibility study. NeuroImage, 18:348-359, 2003. (pdf) (bibtex: Ciccarelli-2003-FDT).
[Golay et al., 2002]
Xavier Golay, Hangyi Jiang, Peter C.M. van Zijl, and Susumu Mori. High-Resolution Isotropic 3D Diffusion Tensor Imaging of the Human Brain. Magnetic Resonance in Medicine, 47:837-843, 2002. (pdf) (bibtex: Golay-2002-HID).
[Guye et al., 2003]
Maxime Guye, Geoffrey J.M. Parker, Mark Symms, Philip Boulby, Claudia A.M. Wheeler-Kingshott, Afraim Salek-Haddadi, Gareth J. Barker, and John S. Duncan. Combined functional MRI and tractography to demonstrate the connectivity of the human primary motor cortex in vivo. NeuroImage, 19:1349-1360, 2003. (pdf) (bibtex: Guye-2003-CFM).
[Mangin et al., 1995]
Jean-Francois Mangin, Jean Regis, Isabelle Bloch, Vincent Frouin, Y. Samson, and Jaime Lopez-Krahe. A MRF Based Random Graph Modelling the Human Cortical Topography. CVRMed, (177-183), 1995. (pdf) (bibtex: Mangin-1995-MBR).
[Tench et al., 2002]
C.R. Tench, P.S. Morgan, M. Wilson, and L.D. Blumhardt. White Matter Mapping Using Diffusion Tensor MRI. Magnetic Resonance in Medicine, 47:967-972, 2002. (pdf) (bibtex: Tench-2002-WMM).
[Tuch et al., 1999]
D.S. Tuch, R.M. Weisskoff, J.W. Belliveau, and V.J. Wedeen. High angular resolution diffusion imaging of the human brain. In Proceedings of the 7th Annual Meeting of ISMRM, page 321, 1999. (bibtex: Tuch-1999-HAR).
[Poupon et al., 2001]
C. Poupon, J. Mangin, C.A. Clark, V. Frouin, J. Regis, D. Le Bihan, and I. Bloch. Towards inference of human brain connectivity from MR diffusion tensor data. Med. Image Anal., 5(1):1-15, 2001. (pdf) (bibtex: Poupon-2001-TIH).
[Riviere et al., 2000]
Denis Riviere, Jean-Francois Mangin, Dimitri Papadopoulos-Orfanos, Jean-Marc Martinez, Vincent Frouin, and Jean Regis. Automatic Recognition of Cortical Sulci Using a Congregation of Neural Networks. In MICCAI, pages 40-49, 2000. (pdf) (bibtex: Riviere-2000-ARC).
[Hagmann et al., 2003]
P. Hagmann, J.-P. Thiran, L. Jonasson, P. Vandergheynst, S. Clarke, P. Maeder, and R. Meulib. DTI mapping of human brain connectivity: statistical fibre tracking and virtual dissection. NeuroImage, 19:545-554, 2003. (pdf) (bibtex: Hagmann-2003-DMH).
fiber mapping
[Parker et al., 2003]
Geoffrey J.M. Parker, Hamied A. Haroon, and Claudia A.M. Wheeler-Kingshott. A Framework for a Streamline-Based Probabilistic Index of Connectivity (PICo) Using a Structural Interpretation of MRI Diffusion Measurements. JOURNAL OF MAGNETIC RESONANCE IMAGING, 18:242-254, 2003. (pdf) (bibtex: Parker-2003-FSP).
[Campbell et al., 2004]
Jennifer S. W. Campbell, Kaleem Siddiqi, and G. Bruce Pike. WHITE MATTER FIBRE TRACTOGRAPHY AND SCALAR CONNECTIVITY ASSESSMENT USING FIBRE ORIENTATION LIKELIHOOD DISTRIBUTION. In CVPR, 2004. (pdf) (bibtex: Campbell-2004-WMF).
[Campbell et al., 2002]
Jennifer S.W. Campbell, Kaleem Siddiqi, and G. Bruce Pike. White Matter Fibre Tract Likelihood Evaluated using Normalized RMS Diffusion Distance. In ISMRM, page 1130, 2002. (pdf) (bibtex: Campbell-2002-WMF).
[Caramanos et al., 2002]
Z. Caramanos, J.S.W. Campbell, S. Narayanan, S.J. Francis, S.B. Antel, H. Reddy, P.M. Matthews, D. Sappey-Marinier, G.B. Pike, and D. L. Arnold. Axonal Integrity and Fractional Anisotropy in the Normal-Appearing White Matter of Patients with Multiple Sclerosis: Relationship to Cerebro-Functional Reorganization and Clinical Disability. In ISMRM, page 590, 2002. (pdf) (bibtex: Caramanos-2002-AIF).
[Corouge et al., 2004]
Isabelle Corouge, Sylvain Gouttard, and Guido Gerig. TOWARDS A SHAPE MODEL OF WHITE MATTER FIBER BUNDLES USING DIFFUSION TENSOR MRI. In International Symposium on Biomedical Imaging, pages 344-347, 2004. (pdf) (bibtex: Corouge-2004-TSM).
[Zhang et al., 2001]
Y. Zhang, M. Brady, and S. Smith. Segmentation of brain MR images through a hidden Markov random field model and the expectation maximization algorithm. IEEE Transactions on Medical Imaging, 20(1):45-57, 2001. (pdf) (bibtex: Zhang-2001-SBM).
[Pierpaoli et al., 2001]
C. Pierpaoli, A.S. Barnett, S. Pajevic, A. Virta, and P.J. Basser. Validation of DT-MRI tractography in the descending motor pathways of human subjects. In International Society for Magnetic Resonance in Medicine (ISMRM), page 501, Glasgow, 2001. (bibtex: Pierpaoli-2001-VDT).
[Sinha et al., 2004]
S. Sinha, M. E. Bastin, J. M. Wardlaw, P. A. Armitage, and I. R. Whittle. Effects of dexamethasone on peritumoural oedematous brain: a DT-MRI study. J. Neurol. Neurosurg. Psychiatry, 2004. In Press (bibtex: Sinha-2004-EDP).
[Duda et al., 2000]
R. O. Duda, P. E. Hart, and D. G. Stork. Pattern Classification. Wiley-Interscience Publication, 2000. (bibtex: Duda-2000-PCL).
[Ragin et al., 2004]
A. B. Ragin, P. Storey, B. A. Cohen, L. G. Epstein, and R. R. Edelman. Whole brain diffusion tensor imaging in HIV-associated cognitive impairment. AJNR Am. J. Neuroradiol., 25(2):195-200, 2004. (bibtex: Ragin-2004-WBD).
[Ding et al., 2003]
Zhaohua Ding, John C. Gore, and Adam W. Anderson. Classification and Quantification of Neuronal Fiber Pathways Using Diffusion Tensor MRI. Magnetic Resonance in Medicine, 49:716-721, 2003. (pdf) (bibtex: Ding-2003-CQN).
[CONTURO et al., 1999]
THOMAS E. CONTURO, NICOLAS F. LORI, THOMAS S. CULL, ERBIL AKBUDAK, ABRAHAM Z. SNYDER, JOSHUA S. SHIMONY, ROBERT C. MCKINSTRY, HAROLD BURTON, and MARCUS E. RAICHLE. Tracking neuronal fiber pathways in the living human brain. In Proc. Natl. Acad. Sci. USA, pages 10422-10427, August 1999. (pdf) (bibtex: Conturo-1999-TNF).
[Jones et al., 1999]
D. K. Jones, A. Simmons, S. C. Williams, and M. A. Horsfield. Non-invasive assessment of axonal fiber connectivity in the human brain via diffusion tensor MRI. Magnetic Resonance in Medicine, 42(1):37-41, July 1999. (pdf) (bibtex: Jones-1999-NAA).
[Mori et al., 2000]
S. Mori, W. E. Kaufmann, J. D. Pearlson, B. J. Crain, B. Stieltjes, M. Solaiyappan, and P. C. van Zijl. In vivo visualization of human neural pathways by magnetic resonance imaging. Ann. Neurol., 47(3):421-424, March 2000. (bibtex: Mori-2000-IVV).
[Parker et al., 2002]
Geoffrey J. M. Parker, Claudia A. M. Wheeler-Kingshott, and Gareth J. Barker. Estimating Distributed Anatomical Connectivity Using Fast Marching Methods and Diffusion Tensor Imaging. IEEE TRANSACTIONS ON MEDICAL IMAGING, 21(5):505-512, May 2002. (pdf) (bibtex: Parker-2002-EDA).
[Burgel et al., 1999]
U. Burgel, T. Schormann, A. Schleicher, and K. Zilles. Mapping of Histologically Identified Long Fiber Tracts in Human Cerebral Hemispheres to the MRI Volume of a Reference Brain: Position and Spatial Variability of the Optic Radiation. NeuroImage, 10:489-499, 1999. (pdf) (bibtex: Burgel-1999-MHI).
[Rademacher et al., 2001]
J. Rademacher, U. Burgel, S. Geyer, T. Schormann, A. Schleicher, H. J. Freund, and K. Zilles. Variability and asymmetry in the human precentral motor system. A cytoarchitectonic and myeloarchitectonic brain mapping study. Brain, 124:2232-2258, 2001. (pdf) (bibtex: Rademacher-2001-VAH).
[Maier et al., 2004]
Stephan E. Maier, Sridhar Vajapeyam, Hatsuho Mamata, Carl-Fredrik Westin, Ferenc A. Jolesz, and Robert V. Mulkern. Biexponential Diffusion Tensor Analysis of Human Brain Diffusion Data. Magnetic Resonance in Medicine, 51:321-330, 2004. (pdf) (bibtex: Maier-2004-BDT).
[Meyer et al., 1999]
James W. Meyer, Nikos Makris, Julianna F. Bates, Verne S. Caviness, Jr, and David N. Kennedy. MRI-Based Topographic Parcellation of Human Cerebral White Matter, I. Technical Foundations. NeuroImage, 9:1-17, 1999. (pdf) (bibtex: Meyer-1999-MTP).
[Mori and Barker, 1999]
Susumu Mori and Peter B. Barker. Diffusion Magnetic Resonance Imaging: Its Principle and Applications. THE ANATOMICAL RECORD (NEW ANAT.), 257:102-109, 1999. (pdf) (bibtex: Mori-1999-DMR).
[Kubicki et al., 2002]
Marek Kubicki, Carl-Fredrik Westin, Stephan E. Maier, Hatsuho Mamata, Melissa Frumin, Hal Ersner-Hershfield, Ron Kikinis, Ferenc A. Jolesz, Robert McCarley, and Martha E. Shenton. Diffusion Tensor Imaging and Its Application to Neuropsychiatric Disorders. Harvard Rev. of Psychiatry, 10:234-336, 2002. (pdf) (bibtex: Kubicki-2002-DTI).
Survey on indices, applications
[Sundgren et al., 2004]
P. C. Sundgren, Q. Dong, D. Gomez-Hassan, S. K. Mukherji, P. Maly, and R. Welsh. Diffusion tensor imaging of the brain: review of clinical applications. Neuroradiology, 46(5):339-350, May 2004. (pdf) (bibtex: Sundgren-2004-DTI).
[Spicer et al., 2004]
Mark A. Spicer, Martin van Velsen, John P. Caffrey, and Michael L. J. Apuzzo. VIRTUAL REALITY NEUROSURGERY: A SIMULATOR BLUEPRINT. Neurosurgery, 54(4):783-797, April 2004. (pdf) (bibtex: Spicer-2004-VRN).
[Peng et al., 2004]
S. S. Peng, W. T. Lee, Y. H. Wang, and K. M. Huang. Cerebral diffusion tensor images in children with tuberous sclerosis: a preliminary report. Pediatr. Radiol., 34(5):387-392, May 2004. (bibtex: Peng-2004-CDT).
[Yoshikawa et al., 2004]
K. Yoshikawa, Y. Nakata, K. Yamada, and M. Nakagawa. Early pathological changes in the parkinsonian brain demonstrated by diffusion tensor MRI. J. Neurol. Neurosurg. Psychiatry, 75:481-484, 2004. (pdf) (bibtex: Yoshikawa-2004-EPC).
[Dong et al., 2004]
Qian Dong, Robert C. Welsh, Thomas L. Chenevert, Ruth C. Carlos, Pia Maly-Sundgren, Diana M. Gomez-Hassan, and Suresh K. Mukherji. Clinical Applications of Diffusion Tensor Imaging. JOURNAL OF MAGNETIC RESONANCE IMAGING, 19:6-18, 2004. (pdf) (bibtex: Dong-2004-CAD).
[Kim et al., 2003]
Dae-Shik Kim, Mina Kima, Itamar Ronena, Elia Formisanob, Keun-Ho Kima, Kamil Ugurbila, Susumu Moric, and Rainer Goebelb. In vivo mapping of functional domains and axonal connectivity in cat visual cortex using magnetic resonance imaging . Magnetic Resonance Imaging, 21(10):1131-1140, December 2003. (pdf) (bibtex: Kim-2003-IVM).
[Taylor et al., 2004]
Warren D. Taylor, Edward Hsu, K. Ranga Rama Krishnan, and James R. MacFall. Diffusion Tensor Imaging: Background, Potential, and Utility in Psychiatric Research. BIOL. PSYCHIATRY, 55:201-207, 2004. (pdf) (bibtex: Taylor-2004-DTI).
Survey of DTI in Psychiatric Research
[Szeszko et al., 2003]
Philip R. Szeszko, Joshua Vogel, Manzar Ashtari, Anil K. Malhotra, John Bates, John M. Kane, Robert M. Bilder, Theresa Frevert, and Kelvin Lim. Sex differences in frontal lobe white matter microstructure: a DTI study. NeuroReport, 14(18):2469-2473, December 2003. (pdf) (bibtex: Szeszko-2003-SDF).
[Tuch et al., 2003]
David S. Tuch, Timothy G. Reese, Mette R. Wiegell, and Van J. Wedeen. Diffusion MRI of Complex Neural Architecture. Neuron, 40:885-895, December 2003. (pdf) (bibtex: Tuch-2003-DMC).
[Wu et al., 2003]
J. S. Wu, L. F. Zhou, X. N. Hong, Y. Mao, and G. H. Du. Role of diffusion tensor imaging in neuronavigation surgery of brain tumors involving pyramidal tracts. Zhonghua Wai Ke Za Zhi, 41(9):662-666, September 2003. (bibtex: Wu-2003-RDT).
[Coulon et al., 2004]
O. Coulon, D.C. Alexander, and S. Arridge. Diffusion tensor magnetic resonance image regularization. Medical Image Analysis, 8:47-67, 2004. (pdf) (bibtex: Coulon-2004-DTM).
[Wakana et al., 2004]
Setsu Wakana, Hangyi Jiang, Lidia M. Nagae-Poetscher, Peter C. M. van Zijl, and Susumu Mori. Fiber Tract–based Atlas of Human White Matter Anatomy. Radiology, 230:77-87, 2004. (pdf) (bibtex: Wakana-2004-FTA).
[Westerhausen et al., 2003]
Rene Westerhausen, Christof Walter, Frank Kreuder, Ralf Arne Wittling, Elisabeth Schweiger, and Werner Wittling. The influence of handedness and gender on the microstructure of the human corpus callosum: a diffusion-tensor magnetic resonance imaging study. Neuroscience Letters, 351:99-102, 2003. (pdf) (bibtex: Westerhausen-2003-IHG).
[Watts et al., 2003]
Richard Watts, Conor Liston, Sumit Niogi, and Aziz M. Ulug. FIBER TRACKING USING MAGNETIC RESONANCE DIFFUSION TENSOR IMAGING AND ITS APPLICATIONS TO HUMAN BRAIN DEVELOPMENT. MENTAL RETARDATION AND DEVELOPMENTAL DISABILITIES RESEARCH REVIEWS, 9:168-177, 2003. (pdf) (bibtex: Watts-2003-FTU).
Some fMRI references.
[Basser and Pajevic, 2003]
P. J. Basser and S. Pajevic. A normal distribution for tensor-valued random variables: applications to diffusion tensor MRI. IEEE Trans. Med. Imaging, 22(7):785-794, July 2003. (bibtex: Basser-2003-NDT).
[Bilgen and Narayana, 2003]
Mehmet Bilgen and Ponnada A. Narayana. Mohr diagram interpretation of anisotropic diffusion indices in MRI. Magnetic Resonance Imaging, 31:567-572, 2003. (pdf) (bibtex: Bilgen-2003-MDI).
[Catani et al., 2003]
Marco Catani, Derek K. Jones, Rosario Donato, and Dominic H. ffytche. Occipito-temporal connections in the human brain. Brain, 126:2093-2107, 2003. (pdf) (bibtex: Catani-2003-OTC).
[Hasan and Narayana, 2003]
Khader M. Hasan and Ponnada A. Narayana. Computation of the Fractional Anisotropy and Mean Diffusivity Maps Without Tensor Decoding and Diagonalization: Theoretical Analysis and Validation. Magnetic Resonance in Medicine, 50:589-598, 2003. (pdf) (bibtex: Khader-2003-CFA).
[Kunimatsu et al., 2003]
A. Kunimatsu, S. Aoki, Y. Masutani, O. Abe, H. Mori, and K. Ohtomo. Three-dimensional white matter tractography by diffusion tensor imaging in ischaemic stroke involving the corticospinal tract. Neuroradiology, 45(8):532-535, August 2003. (pdf) (bibtex: Kunimatsu-2003-TDW).
[Wiegell et al., 2003]
M. R. Wiegell, D. S. Tuch, H. B. Larsson, and V. J. Wedeen. Automatic segmentation of thalamic nuclei from diffusion tensor magnetic resonance imaging. Neuroimage, 19:391-401, June 2003. (pdf) (bibtex: Wiegell-2003-AST).
[Xu et al., 2003]
D. Xu, S. Mori, D. Shen, P. C. van Zijl, and C. Davatzikos. Spatial normalization of diffusion tensor fields. Magn. Reson. Med., 50(1):175-182, July 2003. (pdf) (bibtex: Xu-2003-SND).
[Hirsch et al., 2003]
J. G. Hirsch, S. M. Schwenk, C. Rossmanith, M. G. Hennerici, and A. Gass. Deviations from the diffusion tensor model as revealed by contour plot visualization using high angular resolution diffusion-weighted imaging (HARDI). MAGMA, 16(2):93-102, July 2003. (pdf) (bibtex: Hirsch-2003-DDT).
[Pfefferbaum and Sullivan, 2003]
A. Pfefferbaum and E.V. Sullivan. Increased brain white matter diffusivity in normal adult aging: Relationship to anisotropy and partial voluming. Magn Reson Med, 49(5):953-961, 2003. (pdf) (bibtex: Pfefferbaum-2003-IBW).
[Ciccarelli et al., 2003]
O. Ciccarelli, G. J. M. Parker, A. T. Toosy, C. A. M. Wheeler-Kingshott, G. J. Barker, P. A. Boulby, D. H. Miller, and A. J. Thompsona. From diffusion tractography to quantitative white matter tract measures: a reproducibility study. NeuroImage, 18:348-359, 2003. (pdf) (bibtex: Ciccarelli-2003-DTQ).
[Aoki et al., 2003]
Yoshitaka Masutani, Shigeki Aoki, Osamu Abe, Naoto Hayashi, and Kuni Otomo. MR diffusion tensor imaging: recent advance and new techniques for diffusion tensor visualization. European Journal of Radiology, 46:53-66, 2003. (pdf) (bibtex: Masutani-2003-MDT).
[Pajevica and Basser, 2003]
Sinisa Pajevica and Peter J. Basser. Parametric and non-parametric statistical analysis of DT-MRI data. Journal of Magnetic Resonance, 161:1-14, 2003. (pdf) (bibtex: Pajevic-2003-PNP).
[Horsfield and Jones, 2002]
M. A. Horsfield and D. K. Jones. Applications of diffusion-weighted and diffusion tensor MRI to white matter diseases—a review. NMR Biomed., 15(7-8):570-577, 2002. (pdf) (bibtex: Horsfield-2002-ADD).
[Lim and Helpern, 2002]
K. O. Lim and J. A. Helpern. Neuropsychiatric applications of DTI—a review. NMR Biomed., 15(7-8):587-593, 2002. (pdf) (bibtex: Lim-2002-NAD).
Survey of Neuropsychiatric applications
[Tseng et al., 2003]
Wen-Yih I. Tseng, Van J. Wedeen, Timothy G. Reese, R. Neal Smith, and Elkan F. Halpern. Diffusion Tensor MRI of Myocardial Fibers and Sheets: Correspondence With Visible Cut-Face Texture. JOURNAL OF MAGNETIC RESONANCE IMAGING, 17:31-42, 2003. (pdf) (bibtex: Tseng-2003-DTM).
[Zhukov and Barr, 2003]
Leonid Zhukov and Alan H. Barr. Heart-Muscle Fiber Reconstruction from Diffusion Tensor MRI. In Proceedings of IEEE Visualization '03, pages 597-602, 2003. (pdf) (bibtex: Zhukov-2003-HMF).
[Casey, 2002]
B. J. Casey. Windows into the Human Brain. Science, 296:1408-1409, May 2002. (pdf) (bibtex: Casey-2002-WHB).
[Werring et al., 1999]
D. J. Werring, C. A. Clark, G. J. Parker, D. H. Miller, A. J. Thompson, and G. J. Barker. A direct demonstration of both structure and function in the visual system: combining diffusion tensor imaging with functional magnetic resonance imaging. Neuroimage, 9(3):352-361, March 1999. (pdf) (bibtex: Werring-1999-DDB).
[Huisman et al., 2003]
T. A. Huisman, A. G. Sorensen, K. Hergan, R. G. Gonzalez, and P. W. Schaefer. Diffusion-weighted Imaging for the Evaluation of Diffuse Axonal Injury in Closed Head Injury. J. Comput. Assist. Tomogr., 27(1):5-11, Jan-Feb 2003. (bibtex: Huisman-2003-DWI).
[Callaghan, 1993]
P. T. Callaghan. Principles of nuclear magnetic resonance microscopy. Oxford, Great Britain, 1993. (bibtex: Callaghan-1993-PNM).
[Karger and Heink, 1983]
J. Karger and W. Heink. The propagator representation of molecular transport in microporous crystallites. J. Magn. Reson., 51:1-7, 1983. (bibtex: Karger-1983-PRM).
[Packer and Rees, 1972]
K. J. Packer and C. Rees. Pulsed NMR studies of restricted diffusion I. Droplet size distributions in emulsions. J. Colloid. Interface Sci., 40:206-217, 1972. (bibtex: Packer-1972-PNS).
[Moseley et al., 1990]
M. E. Moseley, Y. Cohen, J. Kucharczyk, J. Mintorovitch, H. S. Asgari, M. F. Wendland, J. Tsuruda, and D. Norman. Diffusion-weighted MR imaging of anisotropic water diffusion in cat central nervous system. Radiology, 176(2):439-445, August 1990. (bibtex: Moseley-1990-DMI).
[Wieshmann et al., 2000]
U.C. Wieshmann, M.R. Symms, G.J. Parker, C.A. Clark, L. Lemieux, G.J. Barker, and S.D. Shorvon. Diffusion tensor imaging demonstrates deviation of fibres in normal appearing white matter adjacent to a brain tumour. J Neurol Neurosurg Psychiatry, 68(4):501-3, 2000. (bibtex: Wieshmann-2000-DTI).
[Ge et al., 2004]
Y. Ge, M. Law, G. Johnson, J. Herbert, J. S. Babb, L.J. Mannon, and R.I. Grossman. Preferential Occult Injury of Corpus Callosum in Multiple Sclerosis Measured by Diffusion Tensor Imaging. J. Magn. Reson. Imaging, 20(1):1-7, July 2004. (pdf) (bibtex: Ge-2004-POI).
[Horsfield et al., 1996]
M. A. Horsfield, M. Lai, and S. Webb. Apparent Diffusion Coefficients in Benign and Secondary Progressive Multiple Sclerosis by Nuclear Magnetic Resonance. Magn. Reson. Med., 36:393-400, 1996. (bibtex: Horsfield-1996-ADC).
[Bozzali et al., 2002]
M. Bozzali, M. Cercignani, M. Sormani, G. Comi, and M. Filippi. Quantification of Brain Gray Matter Damage in Different MS Phenotypes by Use of Diffusion Tensor MR Imaging. A.J.N.R., 23:985-988, 2002. (bibtex: Bozzali-2002-QBG).
[Nusbaum et al., 2000]
A. O. Nusbaum, D. Lu, C.Y. Tang, and S. W. Altas. Quantitative Diffusion Measurements in Focal Multiple Sclerosis Lesions: Correlations with Appearance on T1-Weighted Images. Am. J. Roentgenol, 175:821-825, 2000. (bibtex: Nusbaum-2000-QDM).
[Droogan et al., 1999]
A. G. Droogan, C.A. Clark, D. J. Werring, G. J. Barker, W. I. McDonald, and D. H. Miller. Comparison of MS Clinical Subgroups Using Navigated Diffusion-Weighted Imaging. Magn. Reson. Imaging, 17:653-661, 1999. (bibtex: Droogan-1999-CMS).
[Werring et al., 1999]
D. J. Werring, C. A. Clark, G. J. Barker, A. J. Thompson, and D. H. Miller. Diffusion Tensor Imaging of Lesions and Normal-Appearing White Matter in Multiple Sclerosis. Neurology, 52:1626-1632, 1999. (bibtex: Werring-1999-DTI).
[Bammer et al., 2000]
R. Bammer, M. Augustin, S. Strasser-Fuchs, T. Seifert, P. Kapeller, R. Stollberger, F. Ebner, HP. Hartung, and F. Fazekas. Magnetic resonance diffusion tensor imaging for characterizing diffuse and focal white matter abnormalities in multiple sclerosis. Magnetic Resonance in Medicine, 44(4):583-91, October 2000. (bibtex: Bammer-2000-MRD).
[Guo et al., 2002]
A. Guo, J. MacFall, and J. Provenzale. Multiple Sclerosis; Diffusion Tensor MR Imaging for Evaluation of Normal-Appearing White Matter. Radiology, 222:729-736, 2002. (bibtex: Guo-2002-MSD).
[Filippi et al., 2001]
M. Filippi, M. Cercignani, M. Inglese, M. Horsfield, and G. Comi. Diffusion Tensor Magnetic Resonance Imaging in Multiple Sclerosis. Neurology, 56:304-311, 2001. (bibtex: Filippi-2001-DTM).
[Barr, 1981]
A. Barr. Superquadrics and angle-preserving transformations. IEEE Computer Graphics and Applications, 1(1):11-23, 1981. (bibtex: Barr-1981-SAP).
[Worth et al., 1998]
Andrew J. Worth, Nikos Makris, and Van J. Wedeen. neuro-www.mgh.harvard.edu/cma/staff/ajw/MICCAI98/MICCAI98.html, 1998. Unpublished (bibtex: Worth-1998-FMD).
[Vilanova et al., 2004]
A. Vilanova, G. Berenschot, and C. van Pul. DTI Visualization with Streamsurfaces and Evenly-Spaced Volume Seeding. In VisSym '04 Joint Eurographics—I.E.E.E. T.C.V.G. Symposium on Visualization, Conference Proceedings, pages 173-182, 2004. (pdf) (bibtex: Vilanova-2004-DTI).
[Cory and Galloway, 1990]
D. G. Cory and A. N. Galloway. Measurement of Translational Displacement Probabilities by NMR: An Indicator of Compartmentation. Magn. Reson. Med., 14:435-444, 1990. (bibtex: Cory-1990-MTD).
[Callaghan et al., 1991]
P. T. Callaghan, A. Coy, D. MacGowan, K. J. Packer, and F. O. Zelaya. Diffraction-like Effects in NMR Diffusion Studies of Fluids in Porous Solids. Nature, 351:467-469, 1991. (bibtex: Callaghan-1991-DEN).
[Assaf et al., 2000]
Y. Assaf, A. Mayk, and Y. Cohen. Displacement Imaging of Spinal Cord Using Q-Space Diffusion-Weighted MRI. Magn. Reson. Med., 44:713-722, 2000. (bibtex: Assaf-2000-DIS).
[Assaf and Cohen, 2000]
Y. Assaf and Y. Cohen. Assignment of Water Slow Diffusing Component in CNS Using Q-Space Diffusion MRS: Implications for Fiber Tract Imaging. Magnetic Resonance in Medicine, 43:191-199, 2000. (bibtex: Assaf-2000-AWS).
[Wedeen et al., 2000]
V. J. Wedeen, T. G. Reese, D. S. Tuch, M. R. Weigel, J. G. Dou, R. M. Weiskoff, and D. Chessler. Mapping Fiber Orientation Spectra in Cerebral White Matter with Fourier-Transform Diffusion MRI. In Proceedings of 8th Annual Meeting ISMRM, Denver, page 82, 2000. (bibtex: Wedeen-2000-MFO).
[Tseng et al., 2002]
W. Y. I. Tseng, C. P. Lin, J. H. Chen, and V. J. Wedeen. Diffusion Spectrum Imaging of Complex Cortical Cytoarchitecture in Adult Rats. In Proceedings of 10th Annual Meeting ISNMRM, Honolulu, 2002. (bibtex: Tseng-2002-DSI).
[Glenn et al., 2003]
Orit A. Glenn, Roland G. Henry, Jeffrey I. Berman, Patrick C. Chang, Steven P. Miller, Daniel B. Vigneron, and A. James Barkovich. DTI-Based Three-Dimensional Tractography Detects Differences in the Pyramidal Tracts of Infants and Children With Congenital Hemiparesis. JOURNAL OF MAGNETIC RESONANCE IMAGING, 18:641-648, 2003. (pdf) (bibtex: Glenn-2003-DTT).
[Jones, 2004]
Derek K. Jones. The Effect of Gradient Sampling Schemes on Measures Derived From Diffusion Tensor MRI: A Monte Carlo Study. Magnetic Resonance in Medicine, 51:807-815, 2004. (pdf) (bibtex: Jones-2004-EGS).
[Liu et al., 2004]
Chunlei Liu, Roland Bammer, Burak Acar, and Michael E. Moseley. Characterizing Non-Gaussian Diffusion by Using Generalized Diffusion Tensors. Magnetic Resonance in Medicine, 51:924-937, 2004. (pdf) (bibtex: Liu-2004-CND).
[Brown et al., 2004]
Edward B. Brown, Yves Boucher, Selim Nasser, and Rakesh K. Jain. Measurement of Macromolecular Diffusion Coefficients in Human Tumors. Microvascular Research, 67:231-236, 2004. (pdf) (bibtex: Brown-2004-MMD).
[Law et al., 2004]
Meng Law, Amit M. Saindane, James Babb, Glyn Johnson, Lois J. Mannon, Joseph Herbert, and Robert I. Grossman. Microvascular Abnormality in Relapsing-Remitting Multiple Sclerosis: Perfusion MR Imaging Findings in Normal-appearing White Matter. Radiology, 231:645-652, 2004. (pdf) (bibtex: Law-2004-MAR).
[Provenzale et al., 2004]
James M. Provenzale, Peter McGraw, Pradnya Mhatre, Alexander C. Guo, and David Delong. Peritumoral Brain Regions in Gliomas and Meningiomas: Investigation with Isotropic Diffusion-weighted MR Imaging and Diffusion-Tensor MR Imaging. Radiology, 232:451-460, 2004. (pdf) (bibtex: Provenzale-2004-PBR).
[Zhang et al., 2004]
Song Zhang, Jack H. Simon, David H. Laidlaw, Mark Brown, and David M. Miller. Visualization of the Interaction of Multiple Sclerosis lesions with adjacent white matter fibers using Streamtubes and Streamsurfaces. In IEEE Visualization Poster Compendium, October 2004. (pdf) (bibtex: Zhang-2004-VIM).
[Zhang and Laidlaw, 2004]
Song Zhang and David H. Laidlaw. DTI Fiber Clustering in the Whole Brain. IEEE Visualization 2004 Poster Compendium, October 2004. (pdf) (bibtex: Zhang-2004-DFC).
[Assaf et al., 2004]
Yaniv Assaf, Raisa Z. Freidlin, Gustavo K. Rohde, and Peter J. Basser. New Modeling and Experimental Framework to Characterize Hindered and Restricted Water Diffusion in Brain White Matter . Magnetic Resonance in Medicine, 52:965-978, 2004. (pdf) (bibtex: Assaf-2004-NME).
[Jones and Basser, 2004]
Derek K. Jones and Peter J. Basser. Squashing Peanuts and Smashing Pumpkins:How Noise Distorts Diffusion-Weighted MR Data . Magnetic Resonance in Medicine, 52:979-993, 2004. (pdf) (bibtex: Jones-2004-SPS).
[Wu et al., 2004]
Yu-Chien Wu, Aaron S. Field, Moo K. Chung, Benham Badie, and Andrew L. Alexander. Quantitative Analysis of Diffusion Tensor Orientation: Theoretical Framework. Magnetic Resonance in Medicine, 52:1146-1155, 2004. (pdf) (bibtex: Wu-2004-QAD).
[Simon et al., 2005]
Jack H. Simon, Song Zhang, David H. Laidlaw, D. E. Miller, M. Brown, J. Corboy, D. Singel, and J. Bennett. Strategy for Detecting Neuronal Fibers at Risk for Neurodegeneration In Earliest MS by Streamtube Tractography at 3T. In Proceedings International Society for Magnetic Resonance in Medicine (ISMRM), Miami, FL, May 2005. (pdf) (ppt) (bibtex: Simon-2005-SDN).
[Brennan-Krohn et al., 2004]
Thea Brennan-Krohn, Stephen Correia, Song Zhang, David H. Laidlaw, Paul Malloy, and Steven Salloway. Diffusion-Tensor Imaging and Executive Function in Subcortical Vascular Disease. In Workshop on aging connections: Advanced MRI of age related white matter changes in the brain. ISMRM, 2004. (bibtex: Brennan-2004-DTI).
[Correia et al., 2005]
Stephen Correia, Thea Brennan-Krohn, Song Zhang, David H. Laidlaw, Paul Malloy, and Steven Salloway. Diffusion-Tensor Imaging and Executive Function in Subcortical Ischemic Vascular Disease and Mild Cognitive Impairment. In International Neuropsychological Society conference, February 2005. (ppt) (bibtex: Correia-2005-DTI).
[Zhang and Laidlaw, 2004]
Song Zhang and David H. Laidlaw. Towards a Global Tractography-based Model of FA. In Workshop on aging connections: Advanded MRI of age related white matter changes in the brain. ISMRM, 2004. (pdf) (bibtex: Zhang-2004-TGT).
[Vilanova et al., 2005]
A. Vilanova, Song Zhang, G. Kindlmann, and David H. Laidlaw. An Introduction to Visualization of Diffusion Tensor Imaging and its Applications. In Visualization and Image Processing of Tensor Fields. Springer-Verlag, 2005. (pdf) (bibtex: Vilanova-2005-IVD).
[Beaulieu, 2002]
Christian Beaulieu. The Basis of Anisotropic Water Diffusion in the Nervous System—A Technical Review. NMR in Biomedicine, 15:435-455, 2002. (pdf) (bibtex: Beaulieu-2002-BAW).
[Farkas et al., 2004]
Eszter Farkas, Gergely Donka, Rob A. I. de Vos, Andras Mihaly, Ferenc Bari, and Paul G. M. Luiten. Experimental cerebral hypoperfusion induces white matter injury and microglial activation in the rat brain. Acta Neuropathol, 108:57-64, 2004. (pdf) (bibtex: Farkas-2004-ECH).
[Peters, 2002]
Alan Peters. The effects of normal aging on myelin and nerve fibers: A review. Journal of Neurocytology, 31:581-593, 2002. (pdf) (bibtex: Peters-2002-ENA).
[Batchelor et al., 2005]
P. G. Batchelor, M. Moakher, D. Atkinson, F. Calamante, and A. Connelly. A rigorous framework for diffusion tensor calculus. Magnetic Resonance in Medicine, 53:221-225, January 2005. (pdf) (bibtex: Batchelor-2005-ARF).
[Zhang and Laidlaw, 2005]
Song Zhang and David H. Laidlaw. DTI Fiber Clustering and Cross-subject Cluster Analysis. In Proceedings International Society for Magnetic Resonance in Medicine (ISMRM), Miami, FL, May 2005. (pdf) (bibtex: Zhang-2005-DFC).
[Alexander et al., 2000]
Andrew L. Alexander, Khader Hasan, Gordon Kindlmann, Dennis L. Parker, and Jay S. Tsuruda. A GEOMETRIC ANALYSIS OF DIFFUSION TENSOR MEASUREMENTS OF THE HUMAN BRAIN. In ISMRM, pages 86-86, 2000. (pdf) (bibtex: Alexander-2000-GAD).
[Tseng et al., 1999]
W-Y Isaac Tseng, Timothy G. Reese, R. Neil Smith, Elkan Halprin, and Van J. Wedeen. Histologic Correlation of Myocardial Diffusion Tensor MRI: Fibers and Sheets Both Contribute. In ISMRM, 1999. (pdf) (bibtex: Tseng-1999-HCM).
[Jenkinson et al., 2002]
M. Jenkinson, P.R. Bannister, J.M. Brady, and S.M. Smith. Improved optimisation for the robust and accurate linear registration and motion correction of brain images. NeuroImage, 17(2):825-841, 2002. (bibtex: Jenkinson-2002-IOF).
[Cormans et al., 1994]
J. Cormans, R. Luypaert, F. Verhelle, T. Stadnik, and M. Osteaux. A METHOD FOR MYELIN FIBER ORIENTATION MAPPING USING DIFFUSION-WEIGHTED MR IMAGES. Magnetic Resonance Imaging, 44:443-454, 1994. (bibtex: Cormans-1994-MYB).
[Hagmann et al., 2004]
P. Hagmann, T. G. Reese, W-Y. I. Tseng, R. Meuli, J-P. Thiran, and V. J. Wedeen. Diffusion Spectrum Imaging tractography in complex cerebral white matter: an investigation of the centrum semiovale. In ISMRM, page 623, 2004. (pdf) (bibtex: Hagmann-2004-DSI).
[Jonasson et al., 2005]
L. Jonasson, P. Hagmann, J-P. Thiran, and V. J. Wedeen. Fiber tracts of high angular resolution diffusion MRI are easily segmented with spectral clustering. Technical report, Signal Processing Institute, EPFL, Lausanne, Vaud, Switzerland, 2005. Unknown (pdf) (bibtex: Jonasson-2005-FTH).
[Ahrens et al., 2004]
Eric T. Ahrens, J.M.Allman, E.Bush, David H. Laidlaw, and Song Zhang. Comparative 3D Anatomy of the Prosimian Brain:DTI and Histological Studies. In Proceedings of the Scientific Meeting and Exhibition of the International Society for Magnetic Resonance in Medicine, 2004. (pdf) (bibtex: Ahrens-2004-CAP).
[Simon, 2005]
Jack H. Simon. MRI in Multiple Sclerosis. Physical Medicine and Rehabilitation Clinics of North America, 2005. In Press (pdf) (bibtex: Simon-2005-MRI).
[Simon, 2005]
Jack H. Simon. Update on Multiple Sclerosis. Radiology Clinics of North America, 2005. In Press (pdf) (bibtex: Simon-2005-UMS).
[Salloway et al., 2005]
Steven Salloway, Stephen Correia, Paul Malloy, William Heindel, and David H. Laidlaw. Diffusion-Tensor Imaging: Frontal Executive Function in Vascular Cognitive Impairement. In Collaborative for Translational Brain Research Symposium, April 2005. (ppt) (bibtex: Salloway-2005-DTI).
[Simon et al., 2005]
Jack H. Simon, John Corboy, Song Zhang, and David H. Laidlaw. Visualization of Fibers at Risk for Neuronal Tract Degeneration in Early MS by Streamtube Diffusion Tractography. Platform Presentation at the Academy of Neurology, Miami, FL, April 2005. (bibtex: Simon-2005-VFR).
[Kindlmann, 2004]
Gordon Kindlmann. Superquadric Tensor Glyphs. In Proceeding of The Joint Eurographics—IEEE TCVG Symposium on Visualization, pages 147-154, May 2004. (pdf) (bibtex: Kindlmann-2004-STG).
[Martin, 1996]
John H. Martin. Neuroanatomy Text and Atlas. Appleton and Lange, 2nd edition, 1996. (bibtex: Martin-1996-NTA).
[Bjartmar et al., 2001]
C. Bjartmar, R.P. Kinkel, G. Kidd, R.A. Rudick, and B.D. Trapp. Axonal loss in normal-appearing white matter in a patient with acute MS. Neurology, 57(7):1248-52, October 2001. (bibtex: Bjartmar-2001-ALN).
[Group, 2002]
CHAMPS Study Group. MRI predictors of early conversion to clinically definite MS. Neurology, 59(7):998-1005, 2002. (bibtex: CHAMPS-2002-MPE).
[Jenkinson and Smith, 2001]
M. Jenkinson and S. Smith. A global optimisation method for robust affine registration of brain images. Medical Image Analysis, 5:143-156, 2001. (bibtex: Jenkinson-2001-GOM).
[Jansons and Alexander, 2003]
Kalvis M. Jansons and Daniel Alexander. Persistent angular structure: new insights from diffusion magnetic resonance imaging data. Inverse Problems, 19:1031-1046, 2003. (pdf) (bibtex: Jansons-2003-PAS).
[Zhang et al., 2004]
Song Zhang, Gordon Kindlmann, and David H. Laidlaw. Diffusion Tensor MRI Visualization. In Visualization Handbook. Academic Press, June 2004. (pdf) (bibtex: Zhang-2004-DTM).
[Jones et al., 2005]
Derek K. Jones, Adam R. Travis, Greg Eden, Carlo Pierpaoli, and Peter Basser. PASTA: Pointwise Assessment of Streamline Tractography Attributes. Magnetic Resonance in Medicine, 53:1462-1467, 2005. (pdf) (bibtex: Jones-2005-PPA).
[Bihan et al., 2001]
Denis Le Bihan, Jean-Francois Mangin, Cyril Poupon, Chris A. Clark, Sabina Pappata, Nicolas Molko, and Hughes Chabrait. Diffusion Tensor Imaging: Concepts and Applications. Journal of Magnetic Resonance Imaging, 13:534-546, 2001. (pdf) (bibtex: Bihan-2001-DTI).
[Kaufman et al., 2005]
Jason A. Kaufman, Eric T. Ahrens, David H. Laidlaw, Song Zhang, and John M. Allman. Anatomical analysis of an aye-aye brain (Daubentonia madagascariensis, primates: Prosimii) combining histology, structural magnetic resonance imaging, and diffusion-tensor imaging. Anatomical Record, 287A(1):1026-1037, November 2005. (pdf) (bibtex: Kaufman-2005-AAA).
[Zhang et al., 2006]
Song Zhang, Stephen Correia, David F. Tate, and David H. Laidlaw. Correlating DTI fiber clusters with white-matter anatomy. In Proceedings International Society for Magnetic Resonance in Medicine (ISMRM), 2006. (pdf) (bibtex: Zhang-2006-CDC).
[Lee et al., 2006]
Stephanie Lee, Stephen Correia, David Tate, Robert Paul, Song Zhang, Steven Salloway, Paul Malloy, and David H. Laidlaw. Quantitative Tract-of-Interest Metrics for White-Matter Integrity Based on Diffusion Tensor MRI Data. In Proceedings International Society for Magnetic Resonance in Medicine (ISMRM), 2006. (pdf) (bibtex: Lee-2006-QTM).
[Burgel et al., 2006]
Uli Burgel, Katrin Amunts, Lars Hoemke, Hartmut Mohlberg, Joachim M. Gilsbach, and Karl Zilles. White matter fiber tracts of the human brain: Three-dimensional mapping at microscopic resolution, topography and intersubject variability. NeuroImage, 29:1092-1105, 2006. (pdf) (bibtex: Burgel-2006-WMF).
[Liu et al., 2006]
Tianming Liu, Geoffrey Young, Ling Huang, Nan-Kuei Chen, and Stephen T.C. Wong. 76-Space analysis of grey matter diffusivity: Methods and applications. NeuroImage, 2006. (pdf) (bibtex: Liu-2006-7AO).
[Moberts et al., 2005]
Bart Moberts, Anna Vilanova, and Jarke J. van Wijk. Evaluation of Fiber Clustering Methods for Diffusion Tensor Imaging. In IEEE Visualization, pages 65-72, 2005. (pdf) (bibtex: Moberts-2005-EFC).
[Maddah et al., 2005]
Mahnaz Maddah, Andrea U. J. Mewes, Steven Haker, W. Eric L. Grimson, and Simon K. Warfield. Automated Atlas-Based Clustering of White Matter Fiber Tracts from DTMRI. In MICCAI, 2005. (pdf) (bibtex: Maddah-2005-AAC).
[O’Donnell and Westin, 2005]
Lauren O’Donnell and Carl-Fredrik Westin. White Matter Tract Clustering and Correspondence in Populations. In MICCAI, 2005. (pdf) (bibtex: ODonnell-2005-WMT).
[Akers et al., 2004]
David Akers, Anthony Sherbondy, Rachel Mackenzie, and Robert. Exploration of the Brain's White Matter Pathways with Dynamic Queries. In IEEE Visualization, pages 377-384, 2004. (bibtex: Akers-2004-EBW).
[Brun et al., 2004]
A. Brun, H. Knutsson, H.-J Park, M.E. Shenton, and C.-F. Westin. Clustering fiber traces using normalized cuts. In MICCAI, pages 368-375, 2004. (bibtex: Brun-2004-CFT).
[Chung, 1997]
F. Chung. Spectral Graph Theory. Number 92 in CBMS Regional Conference Series in Mathematics. American Mathematical Society, 1997. (bibtex: Chung-1997-SGT).
[Mori and Zijl, 2002]
S. Mori and P.C.M. van Zijl. Fiber tracking: principles and strategies – a technical review. NMR in Biomedicine, 15(7-8):468-480, 2002. (pdf) (bibtex: Mori-2002-FTP).
[Alt and Godau, 1995]
H. Alt and M. Godau. Computing the Frechet distance between two polygonal curves. International Journal of Computational Geometry and Applications, 5:75-91, 1995. (bibtex: Alt-1995-CFD).
[Thottakara et al., 2006]
Paul Thottakara, Mariana Lazar, Sterling C. Johnson, and Andrew L. Alexander. Application of Brodmann's area templates for ROI selection in white matter tractography studies. NeuroImage, 29(3):868-878, February 2006. (pdf) (bibtex: Thottakara-2006-ABA).
[B. and W., 1997]
JOBARD B. and LEFER W. Creating evenly-spaced streamlines of arbitrary density. In Eurographics Workshop, pages 43-56. Springer Verlag, 1997. (bibtex: Jobard-1997-CES).
[Zhang and Laidlaw, 2006]
Song Zhang and David H. Laidlaw. Sampling DTI integral curves based on DWI forward modeling. In Proceedings of the IEEE International Conference of the Engineering in Medicine and Biology Society (EMBS), New York, NY, August-September 2006. In Press (pdf) (bibtex: Zhang-2006-SDI).
[Besag, 1986]
Julian Besag. On the statisical analysis of dirty pictures. Journal of the Royal Statistical Society B, 48:259-302, 1986. (pdf) (bibtex: Besag-1986-OSA).
[Wang and Vemuri, 2004]
Zhizhou Wang and Baba C. Vemuri. An Affine Invariant Tensor Dissimilarity Measure and Its Applications to Tensor-Valued Image Segmentation. In CVPR, pages 228-233, 2004. (pdf) (bibtex: Wang-2004-AIT).
[Wang et al., 2004]
Zhizhou Wang, Baba C. Vemuri, Yunmei Chen, and Thomas H. Mareci. A constrained variational principle for direct estimation and smoothing of the diffusion tensor field from complex DWI. IEEE Transactions on Medical Imaging, 23(8):930-939, 2004. (pdf) (bibtex: Wang-2004-CVP).
[Wang and Vemuri, 2005]
Zhizhou Wang and B.C. Vemuri. DTI segmentation using an information theoretic tensor dissimilarity measure. IEEE Transactions on Medical Imaging, 24(10):1267-1277, 2005. (pdf) (bibtex: Wang-2005-DSI).
[Kroot, 2005]
J.M.B. Kroot. Analysis of Eddy Currents in a Gradient Coil. PhD thesis, Technische Universiteit Eindhoven, 2005. (pdf) (bibtex: Kroot-2005-AEC).
[Kindlmann, 2004]
Gordon Kindlmann. Visualization and Analysis of Diffusion Tensor Fields. PhD thesis, University of Utah, 2004. (pdf) (bibtex: Kindlmann-2004-VAD).
[Stejskal and Tanner, 1965]
E.O. Stejskal and J.E. Tanner. Spin diffusion measurements: spin echoes in the . J. Chem. Phys., 42:288-292, 1965. (pdf) (bibtex: Stejskal-1965-SDM).
[Behrens, 2004]
Tim Behrens. MR Diffusion Tractography: Methods and Applications. PhD thesis, University of Oxford, 2004. (pdf) (bibtex: Behrens-2004-MDT).
[Hosey et al., 2005]
Tim Hosey, Guy Williams, and Richard Ansorge. Inference of Multiple Fiber Orientations in High Angular Resolution Diffusion Imaging. Magnetic Resonance in Medicine, (54):1480-1489, 2005. (pdf) (bibtex: Hosey-2005-IMF).
[Demiralp et al., 2006]
Cagatay Demiralp, Cullen Jackson, David Karelitz, Song Zhang, and David H. Laidlaw. CAVE and Fishtank Virtual-Reality Displays: A Qualitative and Quantitative Comparison. IEEE Transactions on Visualization and Computer Graphics, 12(3):323-330, May 2006. (pdf) (bibtex: Demiralp-2006-CFV).
[Bailey et al., 1998]
Michael J. Bailey, Klaus Schulten, and John E. Johnson. The use of solid physical models for the study of macromolecular assembly. Current Opinion in Structural Biology, 8(2):202-208, April 1998. (pdf) (bibtex: Bailey-1998-USP).
[Hauser et al., 2001]
H. Hauser, L. Mroz, G. I. Bischi, and M. E. Groeller. Two-Level Volume Rendering. IEEE Transactions on Visualization and Computer Graphics, 7(3):242-252, 2001. (bibtex: Hauser-2001-TVR).
[Cabral et al., 1994]
B. Cabral, N. Cam, and J. Foran. Accelerated Volume Rendering and Tomographic Reconstruction Using Texture Mapping Hardware. In ACM Symposium On Volume Visualization, pages 91-98, 1994. (bibtex: Cabral-1994-AVR).
[Kniss et al., 2002]
J. M. Kniss, C. Hansen, M. Grenier, and T. Robinson. Volume Rendering Multivariate Data to Visualize Meteorological Simulations: A Case Study. In Proceedings of Eurographics—IEEE TCVG Symposiumon Visualization, pages 189-194, 2002. (bibtex: Kniss-2002-VRM).
[Li et al., 2003]
G. Li, U.D. Bordoloi, and H. Shen. Chameleon: An Interactive Texture-based Rendering Framework for Visualizing Three-dimensional Vector Fields. In Proceedings IEEE Visualization, pages 241-248, 2003. (bibtex: Li-2003-CIT).
[Parker et al., 1999]
S. Parker, M. Parker, and Y. Livnat and. Interactive Ray Tracing for Volume Visualization. IEEE Transactions on Visualization and Computer Graphics, 5(3):238-250, 1999. (bibtex: Parker-1999-IRT).
[Wu et al., 2003]
Y. Wu, V. Bhatia, H. Lauer, and L. Seiler. Shear-image order ray casting volume rendering. In Proceedings of the 2003 symposium on Interactive 3D graphics, pages 152-162, 2003. (bibtex: Wu-2003-SOR).
[\"o et al., 1996]
M. Zöckler, D. Stalling, and H.-Ch. Hege. Interactive Visualization of 3D-Vector Fields using Illuminated Streamlines. In Proceedings IEEE Visualization, pages 107-113, 1996. (bibtex: Zoeckler-1996-IVV).
[Doleisch et al., 2003]
H. Doleisch, M. Gasser, and H. Hauser. Interactive feature specification for focus+context visualization of complex simulation data. In Proceedings of the Symposium on Data Visualisation, pages 239-248, 2003. (bibtex: Doleisch-2003-IFS).
[Lengyel, 2000]
J. E. Lengyel. Real-Time Fur. In Eurographics Rendering Workshop, pages 243-256, 2000. (bibtex: Lengyel-2000-RTF).
[Lum and Ma, 2002]
E. B. Lum and K.-L. Ma. Hardware-Accelerated Parallel Non-Photorealistic Volume Rendering. In Proceedings of the Non-Photorealistic Animation and Rendering Conference, pages 67-74, 2002. (bibtex: Lum-2002-HPN).
[Stompel et al., 2002]
A. Stompel, E. B. Lum, and K.-L. Ma. Visualization of Multidimensional, Multivariate Volume Data Using Hardware-Accelerated Non-Photorealistic Rendering Techniques. In 10 th Pacific Conference on Computer Graphics and Applications (PG'02), page 394, 2002. (bibtex: Stompel-2002-VMM).
[Huang et al., 2005]
H. Huang, J. Zhang, H. Jiang, S. Wakana, L. Poetscher, and M. I. Miller. DTI tractography based parcellation of white matter: Application to the mid-sagittal morphology of corpus callosum. NeuroImage, 26(1):195-205, 2005. (bibtex: Huang-2005-DTP).
[Jiang et al., 2006]
H. Jiang, P.C. Van Zijl, J. Kim, G.D. Pearlson, and S. Mori. DTIstudio: Resource program for diffusion tensor computation and fiber bundle tracking. Comput. Methods Programs Biomed., 81(2):106-116, 2006. (bibtex: Jiang-2006-DRP).
[Larsson et al., 2004]
E. M. Larsson, E. Englund, M. Sjobeck, J. Latt, and S. Brockstedt. MRI with diffusion tensor imaging post-mortem at 3.0 t in a patient with frontotemporal dementia. Dement. Geriatr. Cogn. Disord., 17(4):316-319, 2004. (bibtex: Larsson-2004-MDT).
[Bishop and Crittenden, 1964]
R. Bishop and R. Crittenden. Geometry of manifolds. Academic Press, New York, 1964. (bibtex: Bishop-1964-GOM).
[Buxton, 2002]
Richard B. Buxton. Introduction to Functional Magnetic Resonance Imaging: Principles and Techniques. Cambridge University Press, Cambridge, UK, 2002. (bibtex: Buxton-2002-IFM).
[Enchanted Learning, 2006]
Enchanted Learning. http://www.zoomschool.com
/subjects/anatomy/brain/Neuron.shtml
, 2006. (bibtex: Enchanted-2006-NRN).
[Parker, 2000]
G.J.M. Parker. Tracing fibre tracts using fast marching. In ISMRM, page 85, 2000. (bibtex: Parker-2000-TFT).
[Klingberg et al., 1999]
T. Klingberg, C. J. Vaidya, J. D. E. Gabrieli, M. E. Moseley, and M. Hedehus. Myelination and organization of the frontal white matter in children: a diffusion tensor MRI study. NeuroReport, 10:2812-2821, 1999. (bibtex: Klingberg-1999-MOF).
[Naganawa et al., 2003]
Shinji Naganawa, Kimihide Sato, Toshio Katagiri, Takeo Mimura, and Takeo Ishigaki. Regional ADC values of the normal brain: differences due to age, gender, and laterality. European Radiology, 13(1):6-11, 2003. (bibtex: Naganawa-2003-RAV).
[Nakayama et al., 2006]
N Nakayama, A Okumura, J Shinoda, Y-T Yasokawa, K Miwa, S-I Yoshimura, and T Iwama. Evidence for white matter disruption in traumatic brain injury without macroscopic lesions . J. Neurol. Neurosurg. Psychiatry, 77:850-855, 2006. (bibtex: Nakayama-2006-EWM).
[Simon et al., 2006]
Jack H. Simon, Song Zhang, David H. Laidlaw, David E. Miller, Mark Brown, John Corboy, and Jeffrey Bennett. Identification of Fibers at Risk for Degeneration by Diffusion Tractography in Patients at High Risk for MS after a Clinically Isolated Syndrome. Journal of Magnetic Resonance Imaging, October 2006. (pdf) (bibtex: Simon-2006-IFR).
[Paul et al., 2007]
Robert H. Paul, David H. Laidlaw, David F. Tate, Stephanie Lee, Karin Hoth, John Gunstad, Song Zhang, Jeffrey Lawrence, and Tim Flanigan. Neuropsychological and Neuroimaging Outcome of HIV-associated Progressive Multifocal Leukoencephalopathy in the Era of Antiretroviral Therapy. Journal of Integrative Neurocience, 6(1):191-204, March 2007. (pdf) (bibtex: Paul-2007-NNO).
[Demiralp et al., 2007]
Cagatay Demiralp, Daniel Acevedo, Song Zhang, David Tate, Stephen Correia, and David H. Laidlaw. Connectivity-aware sectional visualization of DTI volumes. Technical report, Department of Computer Science, Brown University, 2007. (pdf) (bibtex: Demiralp-2007-CSV).
[O'Donnell and Westin, 2006]
Lauren O'Donnell and Carl-Fredrik Westin. High-Dimensional White Matter Atlas Generation and Group Analysis. In MICCAI, pages 243-251, 2006. (pdf) (bibtex: ODonnell-2006-HWM).
[Jankun-Kelly et al., 2009]
T. J. Jankun-Kelly, Song Zhang, A. C. Callan-Jones, Robert A. Pelcovits, V. A. Slavin, and David H. Laidlaw. Tensor Visualization and Defect Detection for Nematic Liquid Crystals using Shape Characteristics. In Visualization and Processing of Tensor Fields: Advances and Perspectives, pages 213-238. Springer-Verlag, 2009. (bibtex: JankunKelly-2009-TVD).
[Dickie et al., 2014]
David Alexander Dickie, Dominic E. Job, Joanna M. Wardlaw, David H. Laidlaw, and Mark Bastin. Evidence of non-normal distributions in brain imaging data from normal subjects: implications for diagnosis of disease. In Proceedings International Society for Magnetic Resonance in Medicine (ISMRM), 2014. (pdf) (bibtex: Dickie-2014-END).
[Dickie et al., 2015]
David Alexander Dickie, Shadia Mikhael, Dominic E. Job, Joanna M. Wardlaw, David H. Laidlaw, and Mark Bastin. Permutation and parametric tests for effect sizes in voxel-based morphormetry of grey matter volume in brain structural MRI. In Magnetic Resonance Imaging, 2015. (pdf) (bibtex: Dickie-2015-PPT).
Page Owner: David Laidlaw Last Modified: Tue Aug 4 11:25:06 2015