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Tractography References

Author: Song Zhang

[Paul et al., 2016]
Robert H. Paul, Sarah Phillips, Jacqueline Hoare, David H. Laidlaw, Ryan Cabeen, Gayla R. Olbricht, Yuqing Su, Dan J. Stein, Susan Engelbrecht, Sorava Seedat, Lauren E. Salminen, Laurie M. Baker, Jodi Heaps, and John Joska. Neuroimaging abnormalities in clade C HIV are independent of Tat genetic diversity. Journal of NeuroVirology, 2016. (pdf) (bibtex: Paul-2016-NAC).
[Dickie et al., 2015]
David Alexander Dickie, Shadia Mikhael, Dominic E. Job, Joanna M. Wardlaw, David H. Laidlaw, and Mark Bastin. Permutation and parametric tests for effect sizes in voxel-based morphormetry of grey matter volume in brain structural MRI. In Magnetic Resonance Imaging, 2015. (pdf) (bibtex: Dickie-2015-PPT).
[Dickie et al., 2014]
David Alexander Dickie, Dominic E. Job, Joanna M. Wardlaw, David H. Laidlaw, and Mark Bastin. Evidence of non-normal distributions in brain imaging data from normal subjects: implications for diagnosis of disease. In Proceedings International Society for Magnetic Resonance in Medicine (ISMRM), 2014. (pdf) (bibtex: Dickie-2014-END).
[Jankun-Kelly et al., 2009]
T. J. Jankun-Kelly, Song Zhang, A. C. Callan-Jones, Robert A. Pelcovits, V. A. Slavin, and David H. Laidlaw. Tensor Visualization and Defect Detection for Nematic Liquid Crystals using Shape Characteristics. In Visualization and Processing of Tensor Fields: Advances and Perspectives, pages 213-238. Springer-Verlag, 2009. (bibtex: JankunKelly-2009-TVD).
[Jianu et al., 2007]
Doria Jianu, Wenjin Zhou, Cagatay Demiralp, and David H. Laidlaw. Visualizing Spatial Relations Between 3D-DTI Integral Curves Using Texture Patterns. In IEEE Visualization Poster Compendium, 2007. (pdf) (bibtex: Jianu-2007-VSR).
[Paul et al., 2007]
Robert H. Paul, David H. Laidlaw, David F. Tate, Stephanie Lee, Karin Hoth, John Gunstad, Song Zhang, Jeffrey Lawrence, and Tim Flanigan. Neuropsychological and Neuroimaging Outcome of HIV-associated Progressive Multifocal Leukoencephalopathy in the Era of Antiretroviral Therapy. Journal of Integrative Neurocience, 6(1):191-204, March 2007. (pdf) (bibtex: Paul-2007-NNO).
[Burgel et al., 2006]
Uli Burgel, Katrin Amunts, Lars Hoemke, Hartmut Mohlberg, Joachim M. Gilsbach, and Karl Zilles. White matter fiber tracts of the human brain: Three-dimensional mapping at microscopic resolution, topography and intersubject variability. NeuroImage, 29:1092-1105, 2006. (pdf) (bibtex: Burgel-2006-WMF).
[Correia et al., 2006]
Stephen Correia, Stephanie Lee, Paul Malloy, Neil Mehta, Song Zhang, Steven Salloway, and David H. Laidlaw. Diffusion-Tensor MRI Tractography Methods for Assessing White Matter Health and Its Relationship to Cognitive Functioning. In Proceedings of the International Neurophisiological Society, Boston, February 2006. (doc) (bibtex: Correia-2006-DTM).
[Demiralp et al., 2006]
Cagatay Demiralp, Cullen Jackson, David Karelitz, Song Zhang, and David H. Laidlaw. CAVE and Fishtank Virtual-Reality Displays: A Qualitative and Quantitative Comparison. IEEE Transactions on Visualization and Computer Graphics, 12(3):323-330, May 2006. (pdf) (bibtex: Demiralp-2006-CFV).
[Jiang et al., 2006]
H. Jiang, P.C. Van Zijl, J. Kim, G.D. Pearlson, and S. Mori. DTIstudio: Resource program for diffusion tensor computation and fiber bundle tracking. Comput. Methods Programs Biomed., 81(2):106-116, 2006. (bibtex: Jiang-2006-DRP).
[Lee et al., 2006]
Stephanie Lee, Stephen Correia, David Tate, Robert Paul, Song Zhang, Steven Salloway, Paul Malloy, and David H. Laidlaw. Quantitative Tract-of-Interest Metrics for White-Matter Integrity Based on Diffusion Tensor MRI Data. In Proceedings International Society for Magnetic Resonance in Medicine (ISMRM), 2006. (pdf) (bibtex: Lee-2006-QTM).
[Liu et al., 2006]
Tianming Liu, Geoffrey Young, Ling Huang, Nan-Kuei Chen, and Stephen T.C. Wong. 76-Space analysis of grey matter diffusivity: Methods and applications. NeuroImage, 2006. (pdf) (bibtex: Liu-2006-7AO).
[Nakayama et al., 2006]
N Nakayama, A Okumura, J Shinoda, Y-T Yasokawa, K Miwa, S-I Yoshimura, and T Iwama. Evidence for white matter disruption in traumatic brain injury without macroscopic lesions . J. Neurol. Neurosurg. Psychiatry, 77:850-855, 2006. (bibtex: Nakayama-2006-EWM).
[O'Donnell and Westin, 2006]
Lauren O'Donnell and Carl-Fredrik Westin. High-Dimensional White Matter Atlas Generation and Group Analysis. In MICCAI, pages 243-251, 2006. (pdf) (bibtex: ODonnell-2006-HWM).
[Simon et al., 2006]
Jack H. Simon, Song Zhang, David H. Laidlaw, David E. Miller, Mark Brown, John Corboy, and Jeffrey Bennett. Identification of Fibers at Risk for Degeneration by Diffusion Tractography in Patients at High Risk for MS after a Clinically Isolated Syndrome. Journal of Magnetic Resonance Imaging, October 2006. (pdf) (bibtex: Simon-2006-IFR).
[Zhang and Laidlaw, 2006]
Song Zhang and David H. Laidlaw. Sampling DTI integral curves based on DWI forward modeling. In Proceedings of the IEEE International Conference of the Engineering in Medicine and Biology Society (EMBS), New York, NY, August-September 2006. In Press (pdf) (bibtex: Zhang-2006-SDI).
[Zhang et al., 2006]
Song Zhang, Stephen Correia, David F. Tate, and David H. Laidlaw. Correlating DTI fiber clusters with white-matter anatomy. In Proceedings International Society for Magnetic Resonance in Medicine (ISMRM), 2006. (pdf) (bibtex: Zhang-2006-CDC).
[Zhou et al., 2006]
Wenjin Zhou, Peter G. Sibley, Song Zhang, David Tate, and David H. Laidlaw. Perceptual Coloring and 2D Sketching for Segmentation of Neural Pathways. Siggraph 2006, Poster Compendium (BEST POSTER AWARD), August 2006. (pdf) (bibtex: Zhou-2006-PCS).
[Batchelor et al., 2005]
P. G. Batchelor, M. Moakher, D. Atkinson, F. Calamante, and A. Connelly. A rigorous framework for diffusion tensor calculus. Magnetic Resonance in Medicine, 53:221-225, January 2005. (pdf) (bibtex: Batchelor-2005-ARF).
[Correia et al., 2005]
Stephen Correia, Thea Brennan-Krohn, Song Zhang, David H. Laidlaw, Paul Malloy, and Steven Salloway. Diffusion-Tensor Imaging and Executive Function in Subcortical Ischemic Vascular Disease and Mild Cognitive Impairment. In International Neuropsychological Society conference, February 2005. (ppt) (bibtex: Correia-2005-DTI).
[Hosey et al., 2005]
Tim Hosey, Guy Williams, and Richard Ansorge. Inference of Multiple Fiber Orientations in High Angular Resolution Diffusion Imaging. Magnetic Resonance in Medicine, (54):1480-1489, 2005. (pdf) (bibtex: Hosey-2005-IMF).
[Huang et al., 2005]
H. Huang, J. Zhang, H. Jiang, S. Wakana, L. Poetscher, and M. I. Miller. DTI tractography based parcellation of white matter: Application to the mid-sagittal morphology of corpus callosum. NeuroImage, 26(1):195-205, 2005. (bibtex: Huang-2005-DTP).
[Jonasson et al., 2005]
L. Jonasson, P. Hagmann, J-P. Thiran, and V. J. Wedeen. Fiber tracts of high angular resolution diffusion MRI are easily segmented with spectral clustering. Technical report, Signal Processing Institute, EPFL, Lausanne, Vaud, Switzerland, 2005. Unknown (pdf) (bibtex: Jonasson-2005-FTH).
[Jones et al., 2005]
Derek K. Jones, Adam R. Travis, Greg Eden, Carlo Pierpaoli, and Peter Basser. PASTA: Pointwise Assessment of Streamline Tractography Attributes. Magnetic Resonance in Medicine, 53:1462-1467, 2005. (pdf) (bibtex: Jones-2005-PPA).
[Kaufman et al., 2005]
Jason A. Kaufman, Eric T. Ahrens, David H. Laidlaw, Song Zhang, and John M. Allman. Anatomical analysis of an aye-aye brain (Daubentonia madagascariensis, primates: Prosimii) combining histology, structural magnetic resonance imaging, and diffusion-tensor imaging. Anatomical Record, 287A(1):1026-1037, November 2005. (pdf) (bibtex: Kaufman-2005-AAA).
[Kroot, 2005]
J.M.B. Kroot. Analysis of Eddy Currents in a Gradient Coil. PhD thesis, Technische Universiteit Eindhoven, 2005. (pdf) (bibtex: Kroot-2005-AEC).
[Maddah et al., 2005]
Mahnaz Maddah, Andrea U. J. Mewes, Steven Haker, W. Eric L. Grimson, and Simon K. Warfield. Automated Atlas-Based Clustering of White Matter Fiber Tracts from DTMRI. In MICCAI, 2005. (pdf) (bibtex: Maddah-2005-AAC).
[Moberts et al., 2005]
Bart Moberts, Anna Vilanova, and Jarke J. van Wijk. Evaluation of Fiber Clustering Methods for Diffusion Tensor Imaging. In IEEE Visualization, pages 65-72, 2005. (pdf) (bibtex: Moberts-2005-EFC).
[O’Donnell and Westin, 2005]
Lauren O’Donnell and Carl-Fredrik Westin. White Matter Tract Clustering and Correspondence in Populations. In MICCAI, 2005. (pdf) (bibtex: ODonnell-2005-WMT).
[Salloway et al., 2005]
Steven Salloway, Stephen Correia, Paul Malloy, William Heindel, and David H. Laidlaw. Diffusion-Tensor Imaging: Frontal Executive Function in Vascular Cognitive Impairement. In Collaborative for Translational Brain Research Symposium, April 2005. (ppt) (bibtex: Salloway-2005-DTI).
[Simon et al., 2005]
Jack H. Simon, John Corboy, Song Zhang, and David H. Laidlaw. Visualization of Fibers at Risk for Neuronal Tract Degeneration in Early MS by Streamtube Diffusion Tractography. Platform Presentation at the Academy of Neurology, Miami, FL, April 2005. (bibtex: Simon-2005-VFR).
[Simon, 2005]
Jack H. Simon. Update on Multiple Sclerosis. Radiology Clinics of North America, 2005. In Press (pdf) (bibtex: Simon-2005-UMS).
[Simon, 2005]
Jack H. Simon. MRI in Multiple Sclerosis. Physical Medicine and Rehabilitation Clinics of North America, 2005. In Press (pdf) (bibtex: Simon-2005-MRI).
[Simon et al., 2005]
Jack H. Simon, Song Zhang, David H. Laidlaw, D. E. Miller, M. Brown, J. Corboy, D. Singel, and J. Bennett. Strategy for Detecting Neuronal Fibers at Risk for Neurodegeneration In Earliest MS by Streamtube Tractography at 3T. In Proceedings International Society for Magnetic Resonance in Medicine (ISMRM), Miami, FL, May 2005. (pdf) (ppt) (bibtex: Simon-2005-SDN).
[Vilanova et al., 2005]
A. Vilanova, Song Zhang, G. Kindlmann, and David H. Laidlaw. An Introduction to Visualization of Diffusion Tensor Imaging and its Applications. In Visualization and Image Processing of Tensor Fields. Springer-Verlag, 2005. (pdf) (bibtex: Vilanova-2005-IVD).
[Wang and Vemuri, 2005]
Zhizhou Wang and B.C. Vemuri. DTI segmentation using an information theoretic tensor dissimilarity measure. IEEE Transactions on Medical Imaging, 24(10):1267-1277, 2005. (pdf) (bibtex: Wang-2005-DSI).
[Zhang and Laidlaw, 2005]
Song Zhang and David H. Laidlaw. DTI Fiber Clustering and Cross-subject Cluster Analysis. In Proceedings International Society for Magnetic Resonance in Medicine (ISMRM), Miami, FL, May 2005. (pdf) (bibtex: Zhang-2005-DFC).
[Ahrens et al., 2004]
Eric T. Ahrens, J.M.Allman, E.Bush, David H. Laidlaw, and Song Zhang. Comparative 3D Anatomy of the Prosimian Brain:DTI and Histological Studies. In Proceedings of the Scientific Meeting and Exhibition of the International Society for Magnetic Resonance in Medicine, 2004. (pdf) (bibtex: Ahrens-2004-CAP).
[Akers et al., 2004]
David Akers, Anthony Sherbondy, Rachel Mackenzie, and Robert. Exploration of the Brain's White Matter Pathways with Dynamic Queries. In IEEE Visualization, pages 377-384, 2004. (bibtex: Akers-2004-EBW).
[Assaf et al., 2004]
Yaniv Assaf, Raisa Z. Freidlin, Gustavo K. Rohde, and Peter J. Basser. New Modeling and Experimental Framework to Characterize Hindered and Restricted Water Diffusion in Brain White Matter . Magnetic Resonance in Medicine, 52:965-978, 2004. (pdf) (bibtex: Assaf-2004-NME).
[Behrens, 2004]
Tim Behrens. MR Diffusion Tractography: Methods and Applications. PhD thesis, University of Oxford, 2004. (pdf) (bibtex: Behrens-2004-MDT).
[Brennan-Krohn et al., 2004]
Thea Brennan-Krohn, Stephen Correia, Song Zhang, David H. Laidlaw, Paul Malloy, and Steven Salloway. Diffusion-Tensor Imaging and Executive Function in Subcortical Vascular Disease. In Workshop on aging connections: Advanced MRI of age related white matter changes in the brain. ISMRM, 2004. (bibtex: Brennan-2004-DTI).
[Brown et al., 2004]
Edward B. Brown, Yves Boucher, Selim Nasser, and Rakesh K. Jain. Measurement of Macromolecular Diffusion Coefficients in Human Tumors. Microvascular Research, 67:231-236, 2004. (pdf) (bibtex: Brown-2004-MMD).
[Brun et al., 2004]
A. Brun, H. Knutsson, H.-J Park, M.E. Shenton, and C.-F. Westin. Clustering fiber traces using normalized cuts. In MICCAI, pages 368-375, 2004. (bibtex: Brun-2004-CFT).
[Campbell et al., 2004]
[Corouge et al., 2004]
Isabelle Corouge, Sylvain Gouttard, and Guido Gerig. TOWARDS A SHAPE MODEL OF WHITE MATTER FIBER BUNDLES USING DIFFUSION TENSOR MRI. In International Symposium on Biomedical Imaging, pages 344-347, 2004. (pdf) (bibtex: Corouge-2004-TSM).
[Correia et al., 2004]
Stephen Correia, Thea Brennan-Krohn, Song Zhang, David H. Laidlaw, Paul Malloy, and Steven Salloway. Diffusion-Tensor Imaging and Executive Function in Subcortical Ischemic Vascular Disease and Mild Cognitive Impairment. In Proceedings of the International Neurophisiological Society, 2004. (pdf) (doc) (bibtex: Correia-2004-DIE).
[Correia et al., 2004]
Steve Correia, Song Zhang, David H. Laidlaw, Paul Malloy, and Steven Salloway. Diffusion-tensor imaging: linear, planar, and spherical diffusion in CADASIL. In 9th International Conference on Alzheimer's Disease and Related Disorders, 2004. (bibtex: Correia-2004-DTI).
[Coulon et al., 2004]
O. Coulon, D.C. Alexander, and S. Arridge. Diffusion tensor magnetic resonance image regularization. Medical Image Analysis, 8:47-67, 2004. (pdf) (bibtex: Coulon-2004-DTM).
[Dong et al., 2004]
Qian Dong, Robert C. Welsh, Thomas L. Chenevert, Ruth C. Carlos, Pia Maly-Sundgren, Diana M. Gomez-Hassan, and Suresh K. Mukherji. Clinical Applications of Diffusion Tensor Imaging. JOURNAL OF MAGNETIC RESONANCE IMAGING, 19:6-18, 2004. (pdf) (bibtex: Dong-2004-CAD).
[Farkas et al., 2004]
Eszter Farkas, Gergely Donka, Rob A. I. de Vos, Andras Mihaly, Ferenc Bari, and Paul G. M. Luiten. Experimental cerebral hypoperfusion induces white matter injury and microglial activation in the rat brain. Acta Neuropathol, 108:57-64, 2004. (pdf) (bibtex: Farkas-2004-ECH).
[Ge et al., 2004]
Y. Ge, M. Law, G. Johnson, J. Herbert, J. S. Babb, L.J. Mannon, and R.I. Grossman. Preferential Occult Injury of Corpus Callosum in Multiple Sclerosis Measured by Diffusion Tensor Imaging. J. Magn. Reson. Imaging, 20(1):1-7, July 2004. (pdf) (bibtex: Ge-2004-POI).
[Hagmann et al., 2004]
P. Hagmann, T. G. Reese, W-Y. I. Tseng, R. Meuli, J-P. Thiran, and V. J. Wedeen. Diffusion Spectrum Imaging tractography in complex cerebral white matter: an investigation of the centrum semiovale. In ISMRM, page 623, 2004. (pdf) (bibtex: Hagmann-2004-DSI).
[Jones and Basser, 2004]
Derek K. Jones and Peter J. Basser. Squashing Peanuts and Smashing Pumpkins:How Noise Distorts Diffusion-Weighted MR Data . Magnetic Resonance in Medicine, 52:979-993, 2004. (pdf) (bibtex: Jones-2004-SPS).
[Jones, 2004]
Derek K. Jones. The Effect of Gradient Sampling Schemes on Measures Derived From Diffusion Tensor MRI: A Monte Carlo Study. Magnetic Resonance in Medicine, 51:807-815, 2004. (pdf) (bibtex: Jones-2004-EGS).
[Kindlmann, 2004]
Gordon Kindlmann. Visualization and Analysis of Diffusion Tensor Fields. PhD thesis, University of Utah, 2004. (pdf) (bibtex: Kindlmann-2004-VAD).
[Kindlmann, 2004]
Gordon Kindlmann. Superquadric Tensor Glyphs. In Proceeding of The Joint Eurographics—IEEE TCVG Symposium on Visualization, pages 147-154, May 2004. (pdf) (bibtex: Kindlmann-2004-STG).
[Larsson et al., 2004]
E. M. Larsson, E. Englund, M. Sjobeck, J. Latt, and S. Brockstedt. MRI with diffusion tensor imaging post-mortem at 3.0 t in a patient with frontotemporal dementia. Dement. Geriatr. Cogn. Disord., 17(4):316-319, 2004. (bibtex: Larsson-2004-MDT).
[Law et al., 2004]
Meng Law, Amit M. Saindane, James Babb, Glyn Johnson, Lois J. Mannon, Joseph Herbert, and Robert I. Grossman. Microvascular Abnormality in Relapsing-Remitting Multiple Sclerosis: Perfusion MR Imaging Findings in Normal-appearing White Matter. Radiology, 231:645-652, 2004. (pdf) (bibtex: Law-2004-MAR).
[Liu et al., 2004]
Chunlei Liu, Roland Bammer, Burak Acar, and Michael E. Moseley. Characterizing Non-Gaussian Diffusion by Using Generalized Diffusion Tensors. Magnetic Resonance in Medicine, 51:924-937, 2004. (pdf) (bibtex: Liu-2004-CND).
[Maier et al., 2004]
Stephan E. Maier, Sridhar Vajapeyam, Hatsuho Mamata, Carl-Fredrik Westin, Ferenc A. Jolesz, and Robert V. Mulkern. Biexponential Diffusion Tensor Analysis of Human Brain Diffusion Data. Magnetic Resonance in Medicine, 51:321-330, 2004. (pdf) (bibtex: Maier-2004-BDT).
[Peng et al., 2004]
S. S. Peng, W. T. Lee, Y. H. Wang, and K. M. Huang. Cerebral diffusion tensor images in children with tuberous sclerosis: a preliminary report. Pediatr. Radiol., 34(5):387-392, May 2004. (bibtex: Peng-2004-CDT).
[Provenzale et al., 2004]
James M. Provenzale, Peter McGraw, Pradnya Mhatre, Alexander C. Guo, and David Delong. Peritumoral Brain Regions in Gliomas and Meningiomas: Investigation with Isotropic Diffusion-weighted MR Imaging and Diffusion-Tensor MR Imaging. Radiology, 232:451-460, 2004. (pdf) (bibtex: Provenzale-2004-PBR).
[Ragin et al., 2004]
A. B. Ragin, P. Storey, B. A. Cohen, L. G. Epstein, and R. R. Edelman. Whole brain diffusion tensor imaging in HIV-associated cognitive impairment. AJNR Am. J. Neuroradiol., 25(2):195-200, 2004. (bibtex: Ragin-2004-WBD).
[Sinha et al., 2004]
S. Sinha, M. E. Bastin, J. M. Wardlaw, P. A. Armitage, and I. R. Whittle. Effects of dexamethasone on peritumoural oedematous brain: a DT-MRI study. J. Neurol. Neurosurg. Psychiatry, 2004. In Press (bibtex: Sinha-2004-EDP).
[Spicer et al., 2004]
Mark A. Spicer, Martin van Velsen, John P. Caffrey, and Michael L. J. Apuzzo. VIRTUAL REALITY NEUROSURGERY: A SIMULATOR BLUEPRINT. Neurosurgery, 54(4):783-797, April 2004. (pdf) (bibtex: Spicer-2004-VRN).
[Stegmann, 2004]
Mikkel B. Stegmann. Generative Interpretation of Medical Images. PhD thesis, Informatics and Mathematical Modelling Technical University of Denmark, 2004. (pdf) (bibtex: Stegmann-2004-GIM).
[Sundgren et al., 2004]
P. C. Sundgren, Q. Dong, D. Gomez-Hassan, S. K. Mukherji, P. Maly, and R. Welsh. Diffusion tensor imaging of the brain: review of clinical applications. Neuroradiology, 46(5):339-350, May 2004. (pdf) (bibtex: Sundgren-2004-DTI).
[Taylor et al., 2004]
Warren D. Taylor, Edward Hsu, K. Ranga Rama Krishnan, and James R. MacFall. Diffusion Tensor Imaging: Background, Potential, and Utility in Psychiatric Research. BIOL. PSYCHIATRY, 55:201-207, 2004. (pdf) (bibtex: Taylor-2004-DTI).
[Vilanova et al., 2004]
A. Vilanova, G. Berenschot, and C. van Pul. DTI Visualization with Streamsurfaces and Evenly-Spaced Volume Seeding. In VisSym '04 Joint Eurographics—I.E.E.E. T.C.V.G. Symposium on Visualization, Conference Proceedings, pages 173-182, 2004. (pdf) (bibtex: Vilanova-2004-DTI).
[Wakana et al., 2004]
Setsu Wakana, Hangyi Jiang, Lidia M. Nagae-Poetscher, Peter C. M. van Zijl, and Susumu Mori. Fiber Tract–based Atlas of Human White Matter Anatomy. Radiology, 230:77-87, 2004. (pdf) (bibtex: Wakana-2004-FTA).
[Wang et al., 2004]
Zhizhou Wang, Baba C. Vemuri, Yunmei Chen, and Thomas H. Mareci. A constrained variational principle for direct estimation and smoothing of the diffusion tensor field from complex DWI. IEEE Transactions on Medical Imaging, 23(8):930-939, 2004. (pdf) (bibtex: Wang-2004-CVP).
[Wang and Vemuri, 2004]
Zhizhou Wang and Baba C. Vemuri. An Affine Invariant Tensor Dissimilarity Measure and Its Applications to Tensor-Valued Image Segmentation. In CVPR, pages 228-233, 2004. (pdf) (bibtex: Wang-2004-AIT).
[Wu et al., 2004]
Yu-Chien Wu, Aaron S. Field, Moo K. Chung, Benham Badie, and Andrew L. Alexander. Quantitative Analysis of Diffusion Tensor Orientation: Theoretical Framework. Magnetic Resonance in Medicine, 52:1146-1155, 2004. (pdf) (bibtex: Wu-2004-QAD).
[Yoshikawa et al., 2004]
K. Yoshikawa, Y. Nakata, K. Yamada, and M. Nakagawa. Early pathological changes in the parkinsonian brain demonstrated by diffusion tensor MRI. J. Neurol. Neurosurg. Psychiatry, 75:481-484, 2004. (pdf) (bibtex: Yoshikawa-2004-EPC).
[Zhang et al., 2004]
Song Zhang, Gordon Kindlmann, and David H. Laidlaw. Diffusion Tensor MRI Visualization. In Visualization Handbook. Academic Press, June 2004. (pdf) (bibtex: Zhang-2004-DTM).
[Zhang and Laidlaw, 2004]
Song Zhang and David H. Laidlaw. Towards a Global Tractography-based Model of FA. In Workshop on aging connections: Advanded MRI of age related white matter changes in the brain. ISMRM, 2004. (pdf) (bibtex: Zhang-2004-TGT).
[Zhang and Laidlaw, 2004]
Song Zhang and David H. Laidlaw. DTI Fiber Clustering in the Whole Brain. IEEE Visualization 2004 Poster Compendium, October 2004. (pdf) (bibtex: Zhang-2004-DFC).
[Zhang et al., 2004]
Song Zhang, Jack H. Simon, David H. Laidlaw, Mark Brown, and David M. Miller. Visualization of the Interaction of Multiple Sclerosis lesions with adjacent white matter fibers using Streamtubes and Streamsurfaces. In IEEE Visualization Poster Compendium, October 2004. (pdf) (bibtex: Zhang-2004-VIM).
[Zhang et al., 2004]
Song Zhang, Mark Bastin, David H. Laidlaw, Saurabh Sinha, Paul A. Armitage, and Thomas S. Deisboeck. Visualization and Analysis of White Matter Structural Asymmetry in Diffusion Tensor MR Imaging Data. Magnetic Resonance in Medicine, 51(1):140-147, 2004. (pdf) (bibtex: Zhang-2004-VAW).
[Aoki et al., 2003]
Yoshitaka Masutani, Shigeki Aoki, Osamu Abe, Naoto Hayashi, and Kuni Otomo. MR diffusion tensor imaging: recent advance and new techniques for diffusion tensor visualization. European Journal of Radiology, 46:53-66, 2003. (pdf) (bibtex: Masutani-2003-MDT).
[Basser and Pajevic, 2003]
P. J. Basser and S. Pajevic. A normal distribution for tensor-valued random variables: applications to diffusion tensor MRI. IEEE Trans. Med. Imaging, 22(7):785-794, July 2003. (bibtex: Basser-2003-NDT).
[Basser and Pajevic, 2003]
Peter J. Basser and Sinisa Pajevic. Dealing with Uncertainty in Diffusion Tensor MR Data. Israel Journal of Chemistry, 43:129-144, 2003. (pdf) (bibtex: Basser-2003-DUD).
[Behrens et al., 2003]
T.E.J. Behrens, M.W. Woolrich, M. Jenkinson, H. Johansen-Berg, R.G. Nunes, S. Clare, P.M. Matthews, J.M. Brady, and S.M. Smith. Characterization and Propagation of Uncertainty in Diffusion-Weighted MR Imaging. Magnetic Resonance in Medicine, 50:1077-1088, 2003. (pdf) (bibtex: Behrens-2003-CPU).
[Bilgen and Narayana, 2003]
Mehmet Bilgen and Ponnada A. Narayana. Mohr diagram interpretation of anisotropic diffusion indices in MRI. Magnetic Resonance Imaging, 31:567-572, 2003. (pdf) (bibtex: Bilgen-2003-MDI).
[Catani et al., 2003]
Marco Catani, Derek K. Jones, Rosario Donato, and Dominic H. ffytche. Occipito-temporal connections in the human brain. Brain, 126:2093-2107, 2003. (pdf) (bibtex: Catani-2003-OTC).
[Ciccarelli et al., 2003]
O. Ciccarelli, G. J. M. Parker, A. T. Toosy, C. A. M. Wheeler-Kingshott, G. J. Barker, P. A. Boulby, D. H. Miller, and A. J. Thompsona. From diffusion tractography to quantitative white matter tract measures: a reproducibility study. NeuroImage, 18:348-359, 2003. (pdf) (bibtex: Ciccarelli-2003-DTQ).
[Ciccarelli et al., 2003]
O. Ciccarelli, G.J.M. Parker, A.T. Toosy, C.A.M. Wheeler-Kingshott, G.J. Barker, P.A. Boulby, D.H. Miller, and A.J. Thompson. From diffusion tractography to quantitative white matter tract measures: a reproducibility study. NeuroImage, 18:348-359, 2003. (pdf) (bibtex: Ciccarelli-2003-FDT).
[Ciccarelli et al., 2003]
O. Ciccarelli, A.T. Toosy, G.J.M. Parker, C.A.M. Wheeler-Kingshott, G.J. Barker, D.H. Miller, and A.J. Thompson. Diffusion tractography based group mapping of major white-matter pathways in the human brain. NeuroImage, 19:1545-1555, 2003. (pdf) (bibtex: Ciccarelli-2003-DTB).
[Ding et al., 2003]
Zhaohua Ding, John C. Gore, and Adam W. Anderson. Classification and Quantification of Neuronal Fiber Pathways Using Diffusion Tensor MRI. Magnetic Resonance in Medicine, 49:716-721, 2003. (pdf) (bibtex: Ding-2003-CQN).
[Doleisch et al., 2003]
H. Doleisch, M. Gasser, and H. Hauser. Interactive feature specification for focus+context visualization of complex simulation data. In Proceedings of the Symposium on Data Visualisation, pages 239-248, 2003. (bibtex: Doleisch-2003-IFS).
[Glenn et al., 2003]
Orit A. Glenn, Roland G. Henry, Jeffrey I. Berman, Patrick C. Chang, Steven P. Miller, Daniel B. Vigneron, and A. James Barkovich. DTI-Based Three-Dimensional Tractography Detects Differences in the Pyramidal Tracts of Infants and Children With Congenital Hemiparesis. JOURNAL OF MAGNETIC RESONANCE IMAGING, 18:641-648, 2003. (pdf) (bibtex: Glenn-2003-DTT).
[Guye et al., 2003]
Maxime Guye, Geoffrey J.M. Parker, Mark Symms, Philip Boulby, Claudia A.M. Wheeler-Kingshott, Afraim Salek-Haddadi, Gareth J. Barker, and John S. Duncan. Combined functional MRI and tractography to demonstrate the connectivity of the human primary motor cortex in vivo. NeuroImage, 19:1349-1360, 2003. (pdf) (bibtex: Guye-2003-CFM).
[Hagmann et al., 2003]
P. Hagmann, J.-P. Thiran, L. Jonasson, P. Vandergheynst, S. Clarke, P. Maeder, and R. Meulib. DTI mapping of human brain connectivity: statistical fibre tracking and virtual dissection. NeuroImage, 19:545-554, 2003. (pdf) (bibtex: Hagmann-2003-DMH).
[Hasan and Narayana, 2003]
Khader M. Hasan and Ponnada A. Narayana. Computation of the Fractional Anisotropy and Mean Diffusivity Maps Without Tensor Decoding and Diagonalization: Theoretical Analysis and Validation. Magnetic Resonance in Medicine, 50:589-598, 2003. (pdf) (bibtex: Khader-2003-CFA).
[Hirsch et al., 2003]
J. G. Hirsch, S. M. Schwenk, C. Rossmanith, M. G. Hennerici, and A. Gass. Deviations from the diffusion tensor model as revealed by contour plot visualization using high angular resolution diffusion-weighted imaging (HARDI). MAGMA, 16(2):93-102, July 2003. (pdf) (bibtex: Hirsch-2003-DDT).
[Huisman et al., 2003]
T. A. Huisman, A. G. Sorensen, K. Hergan, R. G. Gonzalez, and P. W. Schaefer. Diffusion-weighted Imaging for the Evaluation of Diffuse Axonal Injury in Closed Head Injury. J. Comput. Assist. Tomogr., 27(1):5-11, Jan-Feb 2003. (bibtex: Huisman-2003-DWI).
[Jansons and Alexander, 2003]
Kalvis M. Jansons and Daniel Alexander. Persistent angular structure: new insights from diffusion magnetic resonance imaging data. Inverse Problems, 19:1031-1046, 2003. (pdf) (bibtex: Jansons-2003-PAS).
[Jones, 2003]
Jerek K. Jones. Determining and Visualizing Uncertainty in Estimates of Fiber Orientation From Diffusion Tensor MRI. Magnetic Resonance in Medicine, 49:7-12, 2003. (pdf) (bibtex: Jones-2003-DVN).
[Kemper, 2003]
Corey Ann Kemper. Incorporation of Diffusion Tensor MRI in Non-Rigid Registration for Image-Guided Neurosurgery. Master's thesis, Massachusetts Institute of Technology, 2003. (pdf) (bibtex: Kemper-2003-IDT).
[Kim et al., 2003]
Dae-Shik Kim, Mina Kima, Itamar Ronena, Elia Formisanob, Keun-Ho Kima, Kamil Ugurbila, Susumu Moric, and Rainer Goebelb. In vivo mapping of functional domains and axonal connectivity in cat visual cortex using magnetic resonance imaging . Magnetic Resonance Imaging, 21(10):1131-1140, December 2003. (pdf) (bibtex: Kim-2003-IVM).
[Kunimatsu et al., 2003]
A. Kunimatsu, S. Aoki, Y. Masutani, O. Abe, H. Mori, and K. Ohtomo. Three-dimensional white matter tractography by diffusion tensor imaging in ischaemic stroke involving the corticospinal tract. Neuroradiology, 45(8):532-535, August 2003. (pdf) (bibtex: Kunimatsu-2003-TDW).
[Lazar et al., 2003]
Mariana Lazar, David M.Weinstein, Jay S.Tsuruda, Khader M.Hasan, Konstantinos Arfanakis, M.Elizabeth Meyerand, Benham Badie, Howard A.Rowley, Victor Haughton, Aaron Field, , and Andrew L.Alexander. White Matter Tractography Using Diffusion Tensor Deflection. Human Brain Mapping, 18:306-321, 2003. (pdf) (bibtex: Lazar-2003-WMT).
[Li et al., 2003]
G. Li, U.D. Bordoloi, and H. Shen. Chameleon: An Interactive Texture-based Rendering Framework for Visualizing Three-dimensional Vector Fields. In Proceedings IEEE Visualization, pages 241-248, 2003. (bibtex: Li-2003-CIT).
[Naganawa et al., 2003]
Shinji Naganawa, Kimihide Sato, Toshio Katagiri, Takeo Mimura, and Takeo Ishigaki. Regional ADC values of the normal brain: differences due to age, gender, and laterality. European Radiology, 13(1):6-11, 2003. (bibtex: Naganawa-2003-RAV).
[Pajevica and Basser, 2003]
Sinisa Pajevica and Peter J. Basser. Parametric and non-parametric statistical analysis of DT-MRI data. Journal of Magnetic Resonance, 161:1-14, 2003. (pdf) (bibtex: Pajevic-2003-PNP).
[Park et al., 2003]
Hae-Jeong Park, Marek Kubicki, Martha E. Shenton, Alexandre Guimond, Robert W. McCarley, Stephan E. Maier, Ron Kikinis, Ferenc A. Jolesz, and Carl-Fredrik Westin. Spatial normalization of diffusion tensor MRI using multiple channels. NeuroImage, 20:1995-2009, 2003. (pdf) (bibtex: Park-2003-SND).
[Parker et al., 2003]
Geoffrey J.M. Parker, Hamied A. Haroon, and Claudia A.M. Wheeler-Kingshott. A Framework for a Streamline-Based Probabilistic Index of Connectivity (PICo) Using a Structural Interpretation of MRI Diffusion Measurements. JOURNAL OF MAGNETIC RESONANCE IMAGING, 18:242-254, 2003. (pdf) (bibtex: Parker-2003-FSP).
[Pfefferbaum and Sullivan, 2003]
A. Pfefferbaum and E.V. Sullivan. Increased brain white matter diffusivity in normal adult aging: Relationship to anisotropy and partial voluming. Magn Reson Med, 49(5):953-961, 2003. (pdf) (bibtex: Pfefferbaum-2003-IBW).
[Szeszko et al., 2003]
Philip R. Szeszko, Joshua Vogel, Manzar Ashtari, Anil K. Malhotra, John Bates, John M. Kane, Robert M. Bilder, Theresa Frevert, and Kelvin Lim. Sex differences in frontal lobe white matter microstructure: a DTI study. NeuroReport, 14(18):2469-2473, December 2003. (pdf) (bibtex: Szeszko-2003-SDF).
[Tseng et al., 2003]
Wen-Yih I. Tseng, Van J. Wedeen, Timothy G. Reese, R. Neal Smith, and Elkan F. Halpern. Diffusion Tensor MRI of Myocardial Fibers and Sheets: Correspondence With Visible Cut-Face Texture. JOURNAL OF MAGNETIC RESONANCE IMAGING, 17:31-42, 2003. (pdf) (bibtex: Tseng-2003-DTM).
[Tuch et al., 2003]
David S. Tuch, Timothy G. Reese, Mette R. Wiegell, and Van J. Wedeen. Diffusion MRI of Complex Neural Architecture. Neuron, 40:885-895, December 2003. (pdf) (bibtex: Tuch-2003-DMC).
[Watts et al., 2003]
[Westerhausen et al., 2003]
Rene Westerhausen, Christof Walter, Frank Kreuder, Ralf Arne Wittling, Elisabeth Schweiger, and Werner Wittling. The influence of handedness and gender on the microstructure of the human corpus callosum: a diffusion-tensor magnetic resonance imaging study. Neuroscience Letters, 351:99-102, 2003. (pdf) (bibtex: Westerhausen-2003-IHG).
[Wiegell et al., 2003]
M. R. Wiegell, D. S. Tuch, H. B. Larsson, and V. J. Wedeen. Automatic segmentation of thalamic nuclei from diffusion tensor magnetic resonance imaging. Neuroimage, 19:391-401, June 2003. (pdf) (bibtex: Wiegell-2003-AST).
[Wu et al., 2003]
Y. Wu, V. Bhatia, H. Lauer, and L. Seiler. Shear-image order ray casting volume rendering. In Proceedings of the 2003 symposium on Interactive 3D graphics, pages 152-162, 2003. (bibtex: Wu-2003-SOR).
[Wu et al., 2003]
J. S. Wu, L. F. Zhou, X. N. Hong, Y. Mao, and G. H. Du. Role of diffusion tensor imaging in neuronavigation surgery of brain tumors involving pyramidal tracts. Zhonghua Wai Ke Za Zhi, 41(9):662-666, September 2003. (bibtex: Wu-2003-RDT).
[Xu et al., 2003]
D. Xu, S. Mori, D. Shen, P. C. van Zijl, and C. Davatzikos. Spatial normalization of diffusion tensor fields. Magn. Reson. Med., 50(1):175-182, July 2003. (pdf) (bibtex: Xu-2003-SND).
[Zhukov and Barr, 2003]
Leonid Zhukov and Alan H. Barr. Heart-Muscle Fiber Reconstruction from Diffusion Tensor MRI. In Proceedings of IEEE Visualization '03, pages 597-602, 2003. (pdf) (bibtex: Zhukov-2003-HMF).
[Batchelor et al., 2002]
P.G. Batchelor, D.L.G. Hill, D. Atkinson, F. Calamanten, and A. Connellyn. Fibre-tracking by solving the diffusion-convection equation. In Proceedings of ISMRM 2002, 2002. (pdf) (bibtex: Batchelor-2002-FSD).
Added a convection term to the diffusion equation, and use FEM to solve the PDE.
[Beaulieu, 2002]
Christian Beaulieu. The Basis of Anisotropic Water Diffusion in the Nervous System—A Technical Review. NMR in Biomedicine, 15:435-455, 2002. (pdf) (bibtex: Beaulieu-2002-BAW).
[Bjornemo et al., 2002]
Mats Bjornemo, Anders Brun, Ron Kikinis, and Carl-Fredrik Westin. Regularized Stochastic White Matter Tractography Using Diffusion Tensor MRI. In MICCAI2002, 2002. (pdf) (bibtex: Bjornemo-2002-RSW).
Abstract. The development of Diffusion Tensor MRI has raised hopes in the neuro-science community for in vivo methods to track fiber paths in the white matter. A number of approaches have been presented, but there are still several essential problems that need to be solved. In this paper a novel fiber propaga-tion model is proposed, based on stochastics and regularization, allowing paths originating in one point to branch and return a probability distribution of possible paths. The proposed method utilizes the principles of a statistical Monte Carlo method called Sequential Importance Sampling and Resampling (SISR).
[Bjornemo and Brun, 2002]
Mats Bjornemo and Anders Brun. White Matter Fiber Tracking Using Diffusion Tensor MRI. Master's thesis, Linkoping University, 2002. (pdf) (bibtex: Bjornemo-2002-WMF).
Using SISR(sequential importance sampling and resampling) method to estimate the importance of the a fiber(statisical model).
[Bozzali et al., 2002]
M. Bozzali, M. Cercignani, M. Sormani, G. Comi, and M. Filippi. Quantification of Brain Gray Matter Damage in Different MS Phenotypes by Use of Diffusion Tensor MR Imaging. A.J.N.R., 23:985-988, 2002. (bibtex: Bozzali-2002-QBG).
[Brun et al., 2002]
A. Brun, M. Bjornemo, R. Kikinis, and C.-F. Westin. White Matter Tractography Using Sequential Importance Sampling. In ISMRM 2002, page 1131, 2002. (pdf) (bibtex: Brun-2002-WMT).
see Bjornemo:2002:WMF
[Buxton, 2002]
Richard B. Buxton. Introduction to Functional Magnetic Resonance Imaging: Principles and Techniques. Cambridge University Press, Cambridge, UK, 2002. (bibtex: Buxton-2002-IFM).
[Campbell et al., 2002]
Jennifer S.W. Campbell, Kaleem Siddiqi, and G. Bruce Pike. White Matter Fibre Tract Likelihood Evaluated using Normalized RMS Diffusion Distance. In ISMRM, page 1130, 2002. (pdf) (bibtex: Campbell-2002-WMF).
[Campbell et al., 2002]
J. S. W. Campbell, K. Siddiqi, Baba C. Vemuri, and G. B. Pike. A Geometric Flow for White Matter Fibre Tract Reconstruction. In International Symposium On Biomedical Imaging, 2002. (pdf) (bibtex: Campbell-2002-GFW).
Using geometric flow to construct fibers. Construct multipal fibers in parallelle. Deal with branches and merging points.
[Caramanos et al., 2002]
Z. Caramanos, J.S.W. Campbell, S. Narayanan, S.J. Francis, S.B. Antel, H. Reddy, P.M. Matthews, D. Sappey-Marinier, G.B. Pike, and D. L. Arnold. Axonal Integrity and Fractional Anisotropy in the Normal-Appearing White Matter of Patients with Multiple Sclerosis: Relationship to Cerebro-Functional Reorganization and Clinical Disability. In ISMRM, page 590, 2002. (pdf) (bibtex: Caramanos-2002-AIF).
[Casey, 2002]
B. J. Casey. Windows into the Human Brain. Science, 296:1408-1409, May 2002. (pdf) (bibtex: Casey-2002-WHB).
[Catani et al., 2002]
Marco Catani, Robert J. Howard, Sinisa Pajevic, and Derek K. Jones. Virtual in Vivo Interactive Dissection of White Matter Fasciculi in the Human Brain. NeuroImage, 17:77-94, 2002. (pdf) (bibtex: Catani-2002-VII).
[DS, 2002]
Tuch DS. Mapping cortical connectivity with diffusion MRI. In 2002 IEEE International Symposium on Biomedical Imaging, 2002. (bibtex: Tuch-2002-MCC).
[ .html ] Use a statistical model for the path and estimate the probability of the path, find the optimal path between the two points.
[Donnell et al., 2002]
Lauren O Donnell, Steven Haker, and Carl-Fredrik Westin. New Approaches to Estimation of White Matter Connectivity in Diffusion Tensor MRI: Elliptic PDEs and Geodesics in a Tensor-Warped Space . In MICCAI2002, 2002. (bibtex: ODonnell-2002-NAE).
Fiber tracking by solving the steady state heat flow in DTI field.
[Frank, 2002]
Lawrence R. Frank. Characterization of Anisotropy in High Angular Resolution Diffusion-Weighted MRI. Magnetic Resonance in Medicine, 47:1083-1099, 2002. (pdf) (bibtex: Frank-2002-CAH).
[Golay et al., 2002]
Xavier Golay, Hangyi Jiang, Peter C.M. van Zijl, and Susumu Mori. High-Resolution Isotropic 3D Diffusion Tensor Imaging of the Human Brain. Magnetic Resonance in Medicine, 47:837-843, 2002. (pdf) (bibtex: Golay-2002-HID).
[Group, 2002]
CHAMPS Study Group. MRI predictors of early conversion to clinically definite MS. Neurology, 59(7):998-1005, 2002. (bibtex: CHAMPS-2002-MPE).
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Alexandre Guimond, Charles R. G. Guttmann, Simon K. Warfield, and Carl-Fredrik Westin. Deformable Registration of DT-MRI Data Based on Transfomration Invariant Tensor Characteristics. In Proceedings of the IEEE International Symposium on Biomedical Imaging, July 2002. (pdf) (bibtex: Guimond-2002-DRD).
[Guo et al., 2002]
A. Guo, J. MacFall, and J. Provenzale. Multiple Sclerosis; Diffusion Tensor MR Imaging for Evaluation of Normal-Appearing White Matter. Radiology, 222:729-736, 2002. (bibtex: Guo-2002-MSD).
[Hagmann et al., 2002]
P. Hagmann, J.-P. Thiran, P. Vandergheynst, S. Clarke, and R. Meuli. Statistical Fiber Tracking on DT-MRI data as a Potential Tool for Morphological Brain Studies. In ISMRM Workshop on Diffusion MRI: Biophysical Issues (2002), page 240, 2002. (pdf) (bibtex: Hagmann-2002-SFT).
Use a virtual partical random walk model to track the fibers.
[Horsfield and Jones, 2002]
M. A. Horsfield and D. K. Jones. Applications of diffusion-weighted and diffusion tensor MRI to white matter diseases—a review. NMR Biomed., 15(7-8):570-577, 2002. (pdf) (bibtex: Horsfield-2002-ADD).
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M. Jenkinson, P.R. Bannister, J.M. Brady, and S.M. Smith. Improved optimisation for the robust and accurate linear registration and motion correction of brain images. NeuroImage, 17(2):825-841, 2002. (bibtex: Jenkinson-2002-IOF).
[Jones et al., 2002]
D. K. Jones, L.D. Griffin, D.C. Alexander, M. Catani, M.A. Horsfield, R. Howard, and S.C. Williams. Spatial normalization and averaging of diffusion tensor MRI data sets. Neuroimage, 17(2):592-617, 2002. (pdf) (bibtex: Jones-2002-SNA).
[Kniss et al., 2002]
J. M. Kniss, C. Hansen, M. Grenier, and T. Robinson. Volume Rendering Multivariate Data to Visualize Meteorological Simulations: A Case Study. In Proceedings of Eurographics—IEEE TCVG Symposiumon Visualization, pages 189-194, 2002. (bibtex: Kniss-2002-VRM).
[Kubicki et al., 2002]
Marek Kubicki, Carl-Fredrik Westin, Stephan E. Maier, Hatsuho Mamata, Melissa Frumin, Hal Ersner-Hershfield, Ron Kikinis, Ferenc A. Jolesz, Robert McCarley, and Martha E. Shenton. Diffusion Tensor Imaging and Its Application to Neuropsychiatric Disorders. Harvard Rev. of Psychiatry, 10:234-336, 2002. (pdf) (bibtex: Kubicki-2002-DTI).
[Lim and Helpern, 2002]
K. O. Lim and J. A. Helpern. Neuropsychiatric applications of DTI—a review. NMR Biomed., 15(7-8):587-593, 2002. (pdf) (bibtex: Lim-2002-NAD).
[Lum and Ma, 2002]
E. B. Lum and K.-L. Ma. Hardware-Accelerated Parallel Non-Photorealistic Volume Rendering. In Proceedings of the Non-Photorealistic Animation and Rendering Conference, pages 67-74, 2002. (bibtex: Lum-2002-HPN).
[Mori and Zijl, 2002]
S. Mori and P.C.M. van Zijl. Fiber tracking: principles and strategies – a technical review. NMR in Biomedicine, 15(7-8):468-480, 2002. (pdf) (bibtex: Mori-2002-FTP).
[Parker et al., 2002]
Geoffrey J. M. Parker, Claudia A. M. Wheeler-Kingshott, and Gareth J. Barker. Estimating Distributed Anatomical Connectivity Using Fast Marching Methods and Diffusion Tensor Imaging. IEEE TRANSACTIONS ON MEDICAL IMAGING, 21(5):505-512, May 2002. (pdf) (bibtex: Parker-2002-EDA).
[Parker et al., 2002]
Geoffrey J. M. Parker, Klaas E. Stephan, Gareth J. Barker, James B. Rowe, David G. MacManus, Claudia A. M. Wheeler-Kingshott, Olga Ciccarelli, Richard E. Passingham, Rachel L. Spinks, Roger N. Lemon, and Robert Turner. Initial Demonstration of in Vivo Tracing of Axonal Projections in the Macaque Brain and Comparison with the Human Brain Using Diffusion Tensor Imaging and Fast Marching Tractography. NeuroImage, 15(797-809), April 2002. (pdf) (bibtex: Parker-2002-IDI).
Using fast marching tractography to track fibers in macaque brain and compare it with human brain.
[Peters, 2002]
Alan Peters. The effects of normal aging on myelin and nerve fibers: A review. Journal of Neurocytology, 31:581-593, 2002. (pdf) (bibtex: Peters-2002-ENA).
[Ruiz-Alzola et al., 2002]
J. Ruiz-Alzola, C.F. Westin, S.K. Warfield, C. Alberola, S. Maier, and R. Kikinis. Nonrigid registration of 3D tensor medical data. Medical Image Analysis, 6(2):143-161, June 2002. (pdf) (bibtex: RuizAlzola-2002-NR3).
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A. Stompel, E. B. Lum, and K.-L. Ma. Visualization of Multidimensional, Multivariate Volume Data Using Hardware-Accelerated Non-Photorealistic Rendering Techniques. In 10 th Pacific Conference on Computer Graphics and Applications (PG'02), page 394, 2002. (bibtex: Stompel-2002-VMM).
[Tench et al., 2002]
C.R. Tench, P.S. Morgan, M. Wilson, and L.D. Blumhardt. White Matter Mapping Using Diffusion Tensor MRI. Magnetic Resonance in Medicine, 47:967-972, 2002. (pdf) (bibtex: Tench-2002-WMM).
[Tseng et al., 2002]
W. Y. I. Tseng, C. P. Lin, J. H. Chen, and V. J. Wedeen. Diffusion Spectrum Imaging of Complex Cortical Cytoarchitecture in Adult Rats. In Proceedings of 10th Annual Meeting ISNMRM, Honolulu, 2002. (bibtex: Tseng-2002-DSI).
[Tuch et al., 2002]
D.S. Tuch, T.G. Reese, M.R. Wiegell, N. Makris, J.W. Belliveau, and V.J. Wedeen. High angular resolution diffusion imaging reveals intravoxel white matter fiber heterogeneity. Magnetic Resonance in Medicine, 48(4):577-582, October 2002. (pdf) (bibtex: Tuch-2002-HAR).
As title suggests, the paper show that high angular diffusion imaging helps reveal the crossing.
[Tuch, 2002]
D. S. Tuch. Diffusion MRI of complex tissue structure. PhD thesis, Harvard, 2002. (pdf) (bibtex: Tuch-2002-DMC).
[Westin et al., 2002]
C.-F. Westin, S.E. Maier, H. Mamata, A. Nabavi, F.A. Jolesz, and R. Kikinis. Processing and visualization for diffusion tensor MRI. Medical Image Analysis, 6(93-108), 2002. (pdf) (bibtex: Westin-2002-PVD).
[Xu et al., 2002]
Dongrong Xu, Susumu Mori, Meiyappan Solaiyappan, Peter C. M. van Zijl, and Christos Davatzikos. A Framework for Callosal Fiber Distribution Analysis. NeuroImage, 17:1131-1143, 2002. (pdf) (bibtex: Xu-2002-FCF).
[Zheng and Pang, 2002]
Xiaoqiang Zheng and Alex Pang. Volume Deformation For Tensor Visualization. In Proceedings of IEEE Visualization, pages 379-386, 2002. (pdf) (bibtex: Zheng-2002-VDF).
[Zhukov and Barr, 2002]
L. Zhukov and A. Barr. Oriented tensor reconstruction: tracing neural pathways from diffusion tensor MRI. In Proceedings of the IEEE Visualization '02, pages 387-394, 2002. (pdf) (bibtex: Zhukov-2002-OTR).
[AI et al., 2001]
Holodny AI, Schwartz TH, Ollenschleger M, Liu W, and Schulder M. Tumor involvement of the corticospinal tract by tumor: diffusion magnetic resonance tractography with intraoperative correlation. Journal of Neurosurgery, 95(1082), 2001. (bibtex: Holodny-2001-ICT).
[Alexander et al., 2001]
D. C. Alexander, C. Pierpaoli, P. J. Basser, and J. C. Gee. Spatial Transformations of Diffusion Tensor Magnetic Resonance Images. IEEE TRANSACTIONS ON MEDICAL IMAGING, 20(11), November 2001. (pdf) (bibtex: Alexander-2001-STD).
How to perserve orientational information while applying transformations to DTI datasets.
[Bihan et al., 2001]
Denis Le Bihan, Jean-Francois Mangin, Cyril Poupon, Chris A. Clark, Sabina Pappata, Nicolas Molko, and Hughes Chabrait. Diffusion Tensor Imaging: Concepts and Applications. Journal of Magnetic Resonance Imaging, 13:534-546, 2001. (pdf) (bibtex: Bihan-2001-DTI).
[Bihan et al., 2001]
Denis Le Bihan, Jean-Francois Mangin, Cyril Poupon, Chris A. Clark, Sabina Pappata, Nicolas Molko, and Hughes Chabriat. Diffusion Tensor Imaging: Concepts and Applications. JOURNAL OF MAGNETIC RESONANCE IMAGING, 13:534-546, 2001. (pdf) (bibtex: LeBihan-2001-DTI).
[Bjartmar et al., 2001]
C. Bjartmar, R.P. Kinkel, G. Kidd, R.A. Rudick, and B.D. Trapp. Axonal loss in normal-appearing white matter in a patient with acute MS. Neurology, 57(7):1248-52, October 2001. (bibtex: Bjartmar-2001-ALN).
[Coulon et al., 2001]
O. Coulon, D.C. Alexander, and S.R. Arridge. Tensor Field Regularisation for DT-MR Images. In Proceedings of British Conference on Medical Image Understanding and Analysis, 2001. (pdf) (bibtex: Coulon-2001-TFR).
Regularizing principle diffusion direction in an anisotropic fashion. The regularization increases smoothness in PPD.
[Filippi et al., 2001]
M. Filippi, M. Cercignani, M. Inglese, M. Horsfield, and G. Comi. Diffusion Tensor Magnetic Resonance Imaging in Multiple Sclerosis. Neurology, 56:304-311, 2001. (bibtex: Filippi-2001-DTM).
[Hauser et al., 2001]
H. Hauser, L. Mroz, G. I. Bischi, and M. E. Groeller. Two-Level Volume Rendering. IEEE Transactions on Visualization and Computer Graphics, 7(3):242-252, 2001. (bibtex: Hauser-2001-TVR).
[Inati et al., 2001]
S. Inati, H. Farid, K. Sherwin, and S. Grafton. A Global Probabilistic Approach to Fiber Tractography with Diffusion Tensor MRI . In Human Brain Mapping 2001, 2001. (bibtex: Inati-2001-GPA).
Use expectation maximization on a set of Bezier curve models for fiber tracking.
[Jenkinson and Smith, 2001]
M. Jenkinson and S. Smith. A global optimisation method for robust affine registration of brain images. Medical Image Analysis, 5:143-156, 2001. (bibtex: Jenkinson-2001-GOM).
[Pierpaoli et al., 2001]
C. Pierpaoli, A.S. Barnett, S. Pajevic, A. Virta, and P.J. Basser. Validation of DT-MRI tractography in the descending motor pathways of human subjects. In International Society for Magnetic Resonance in Medicine (ISMRM), page 501, Glasgow, 2001. (bibtex: Pierpaoli-2001-VDT).
[Pierpaoli et al., 2001]
Carlo Pierpaoli, Alan Barnett, Sinisa Pajevic, Robert Chen, LaRoy Penix, Anette Virta, and Peter Basser. Water Diffusion Changes in Wallerian Degeneration and Their Dependence on White Matter Architecture. NeuroImage, 13:1174-1185, 2001. (pdf) (bibtex: Pierpaoli-2001-WDC).
[Poupon et al., 2001]
C. Poupon, J. Mangin, C.A. Clark, V. Frouin, J. Regis, D. Le Bihan, and I. Bloch. Towards inference of human brain connectivity from MR diffusion tensor data. Med. Image Anal., 5(1):1-15, 2001. (pdf) (bibtex: Poupon-2001-TIH).
[Rademacher et al., 2001]
J. Rademacher, U. Burgel, S. Geyer, T. Schormann, A. Schleicher, H. J. Freund, and K. Zilles. Variability and asymmetry in the human precentral motor system. A cytoarchitectonic and myeloarchitectonic brain mapping study. Brain, 124:2232-2258, 2001. (pdf) (bibtex: Rademacher-2001-VAH).
[Zhang et al., 2001]
Y. Zhang, M. Brady, and S. Smith. Segmentation of brain MR images through a hidden Markov random field model and the expectation maximization algorithm. IEEE Transactions on Medical Imaging, 20(1):45-57, 2001. (pdf) (bibtex: Zhang-2001-SBM).
[Alexander et al., 2000]
Andrew L. Alexander, Khader Hasan, Gordon Kindlmann, Dennis L. Parker, and Jay S. Tsuruda. A GEOMETRIC ANALYSIS OF DIFFUSION TENSOR MEASUREMENTS OF THE HUMAN BRAIN. In ISMRM, pages 86-86, 2000. (pdf) (bibtex: Alexander-2000-GAD).
[Assaf and Cohen, 2000]
Y. Assaf and Y. Cohen. Assignment of Water Slow Diffusing Component in CNS Using Q-Space Diffusion MRS: Implications for Fiber Tract Imaging. Magnetic Resonance in Medicine, 43:191-199, 2000. (bibtex: Assaf-2000-AWS).
[Assaf et al., 2000]
Y. Assaf, A. Mayk, and Y. Cohen. Displacement Imaging of Spinal Cord Using Q-Space Diffusion-Weighted MRI. Magn. Reson. Med., 44:713-722, 2000. (bibtex: Assaf-2000-DIS).
[Bammer et al., 2000]
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